Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00079 ATGTCCAATTCTGAAGGGGGTAACAACGGCGTCGTCAACGGCGCTGTAATCGACTCTCAGAGACAACAGCCACCGAGCAATGGAGCGATTGTCGTCAAAAAGCCACCCTCCAAAGACCGCCACAGTAAAGTCGACGGTCGCGGTCGTCGTATCCGGATGCCGATCATTTGCGCCGCGCGGGTATTTCAGCTGACCAGGGAGCTTGGCCACAAGTCTGATGGTCAGACCATTGAGTGGCTTCTCCGGCAAGCCGAGCCTTCAATTATAGCTGCTACTGGAACCGGGACTACTCCTGCGAGCTTTTCTTCTGTCTCCGTTTCTGTCAGAGGTGGCGCCGGCTCGGGCTCCCTCTCTTCGTCTTCGACTTCTTCCTCTCTCTCCCTCTCTCGGCCGCAGGCCTTCTCCGGACCCACCCCTTTTATCCTGGGCAAGCGCGTAAGAACCGACGACGACGGAGGCGCTGCAGCTAAAGACGAAGGCGTATCCGTGGGTCCCACGGTGGGCTCCATAGTCGGTCCGGCCGCCGCCGGTGGCTACTGGGCCATTCCTGCTAGACCGGACTTTGGGCAGATATGGAGCTTCGCGGCAGCGACGGGAACGCCGGAATTGATTCAGCCGTCGTCGGTGGCTCAACAAGCTTCTTTGTTTATTCAGCAGCAGCAGCAGTCGATTGGGGAGGCTTCGGCGGCTAGGGTAGGGAATTACCTTCCGGGACATTTGAATTTACTAGCTTCATTATCAGGTGGACACGGCAATTCAGGTCGGAGAGAAGACGACCAACGT 783 57.73 MSNSEGGNNGVVNGAVIDSQRQQPPSNGAIVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAGSGSLSSSSTSSSLSLSRPQAFSGPTPFILGKRVRTDDDGGAAAKDEGVSVGPTVGSIVGPAAAGGYWAIPARPDFGQIWSFAAATGTPELIQPSSVAQQASLFIQQQQQSIGEASAARVGNYLPGHLNLLASLSGGHGNSGRREDDQR 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2766786 2767568 - Bda033265 Bda15g00079 21774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00079 261 MobiDBLite consensus disorder prediction 34 49 - -
Bda15g00079 261 Pfam TCP family transcription factor 37 120 IPR017887 -
Bda15g00079 261 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 258 - -
Bda15g00079 261 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 258 IPR005333 GO:0003700
Bda15g00079 261 MobiDBLite consensus disorder prediction 1 27 - -
Bda15g00079 261 MobiDBLite consensus disorder prediction 112 132 - -
Bda15g00079 261 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Bda15g00079 261 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00462 Bda-Chr14:3323927 Bda15g00079 Bda-Chr15:2766786 5.67E-150 dispersed
Bda14g00488 Bda-Chr14:3543917 Bda15g00079 Bda-Chr15:2766786 5.67E-150 dispersed
Bda15g00079 Bda-Chr15:2766786 Bda14g00846 Bda-Chr14:6520571 4.92E-40 dispersed
Bda15g00075 Bda-Chr15:2600214 Bda15g00079 Bda-Chr15:2766786 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17137 PF03634 TCP 2.20E-32 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00079 K16221 - cpap:110813909 329.331