Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda15g00091 | ATGGGTCTGTCCGCAGAAGCTCAGTTTCATGTATTGGCTGTAGATGACAGCCCCCTTGATCGGAAGTTGATCGAAAAACTCCTTAAGATCTCTTCTTATCAAGTAACAACAGTAGATTCTGGCGTCAATGCCCTGGAATTTCTGGGTTTACAAGAAGATGAAGAGAAGAGGGGAGAAAATGATCACACTGTTCTTCCTGAAACTCATCATCAAGATATTGGAGTAAATTTGATCATCACAGATTACTGTATGCCTGGAATGACCGGTTATGATCTCCTCAGAAAAATCAAGCAATCAAAATCTATGAAAGACACACCTGTAGTGATCATGTCCTCAGAAGATAATCCTTCAAGAATCAACAGATGCCTGGAAGAAGGAGCAGAAGAGTTTATACTAAAGCCAGTAAAAATGGGTGATGTGAGAAAGCTAAGACCCATTGTGCTGAGAGGAAGAGACAAGGAAAATGTAGATGGAAACAACACCGGACAACCTCAGATGTCTGATACAACAAACAAGCACATAAATGTATAG | 531 | 40.49 | MGLSAEAQFHVLAVDDSPLDRKLIEKLLKISSYQVTTVDSGVNALEFLGLQEDEEKRGENDHTVLPETHHQDIGVNLIITDYCMPGMTGYDLLRKIKQSKSMKDTPVVIMSSEDNPSRINRCLEEGAEEFILKPVKMGDVRKLRPIVLRGRDKENVDGNNTGQPQMSDTTNKHINV | 176 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 3136179 | 3137280 | + | Bda011864.1 | Bda15g00091 | 21786 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda15g00091 | 176 | MobiDBLite | consensus disorder prediction | 151 | 176 | - | - | |
| Bda15g00091 | 176 | SUPERFAMILY | CheY-like | 9 | 143 | IPR011006 | - | |
| Bda15g00091 | 176 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 3 | 159 | IPR045279 | GO:0009736 | |
| Bda15g00091 | 176 | MobiDBLite | consensus disorder prediction | 157 | 176 | - | - | |
| Bda15g00091 | 176 | Pfam | Response regulator receiver domain | 11 | 142 | IPR001789 | GO:0000160 | |
| Bda15g00091 | 176 | PANTHER | RESPONSE REGULATOR ARR8, PUTATIVE-RELATED | 3 | 159 | - | - | |
| Bda15g00091 | 176 | Gene3D | - | 10 | 172 | - | - | |
| Bda15g00091 | 176 | CDD | REC_typeA_ARR | 11 | 143 | - | - | |
| Bda15g00091 | 176 | ProSiteProfiles | Response regulatory domain profile. | 10 | 148 | IPR001789 | GO:0000160 | |
| Bda15g00091 | 176 | SMART | REC_2 | 9 | 144 | IPR001789 | GO:0000160 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda05g01024 | Bda-Chr5:58691134 | Bda15g00091 | Bda-Chr15:3136179 | 3.73E-37 | dispersed | |
| Bda11g01678 | Bda-Chr11:50923039 | Bda15g00091 | Bda-Chr15:3136179 | 3.33E-49 | dispersed | |
| Bda14g00828 | Bda-Chr14:6372462 | Bda15g00091 | Bda-Chr15:3136179 | 3.34E-39 | dispersed | |
| Bda15g00091 | Bda-Chr15:3136179 | Bda11g00074 | Bda-Chr11:917530 | 4.59E-15 | dispersed | |
| Bda03g00627 | Bda-Chr3:5238414 | Bda15g00091 | Bda-Chr15:3136179 | 6.87E-25 | transposed | |
| Bda14g00441 | Bda-Chr14:3161064 | Bda15g00091 | Bda-Chr15:3136179 | 2.02E-55 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 17139 | PF00072 | Response_reg | 1.50E-22 | CL0304 | Bda | TR |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda15g00091 | K14492 | - | mnt:21406707 | 224.557 |