Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00131 ATGGGGTCTGATCACCCACTGCCCGAATGGGCTTCAAAGCCTTGCATTATGGGTATCGATGAAGCCGGTCGAGGCCCTGTTCTAGGGCCAATGGTTTACGGGTGCTTGTACTGTTCTCGTTCTTATCAGAAGGCTCTTTCATCTTTGAATTTTGCAGATTCAAAGACGTTAAAGGAAGAAAAGAGGGAAGAACTATTTGAAATTTTGAAAGCTGATGAATCAATTGGATGGGCTGTTGATGTCATAGATCCAAGGGAACTTTCTGCTAAAATGTTAAAGAAAAATAAGATAAATTTGAACGAAATATCACATGACTCTGCAATTGGACTGGTCACAAGGGTCCTAAACCTGGGAGTTCTTCTCACTGAGGTTTATGTGGACACAGTGGGTGATCCTGAAAAGTACAGAATAAAACTCTCGGAAAGATTTCCATCTATCAAATTTGTTGTTGCTAAGAAGGCTGATAGTCTTTATCCAGTCGTGAGTGGAGCGAGCATAGTTGCGAAGGTCACTAGAGACCATGCTTTAAAAGGATGGGTGCTTGGTGAAACTGCTGAAAAAATGCATAGAAATTTTGGTTCTGGATACCCTGGAGATCCTGAAACAAAGGCTTGGTTGGAAGATCACAAACACTCAGTTTTTGGATTTCCGACATTGGTTCGATTCAGTTGGGGTACATGCAATCCATTTTTCAAAAACATGGTTGAAGTTTTATGGGAATGTGACAATGAGGACGAAGAAGACCAGTGTCTGAATGGCAGTATTGGAAAGAAGCAACTGAAGCTAAGCAATGTTGGTTTCACATCATCCAGGAGAAAAAGTGAAGAAGTCGAGTCAAATGCTAGAGGGCGCTGTAAGTTCTTCCAGGCTCGAAAACTAGAGCAACTCACTCGCTTCTAA 900 41.89 MGSDHPLPEWASKPCIMGIDEAGRGPVLGPMVYGCLYCSRSYQKALSSLNFADSKTLKEEKREELFEILKADESIGWAVDVIDPRELSAKMLKKNKINLNEISHDSAIGLVTRVLNLGVLLTEVYVDTVGDPEKYRIKLSERFPSIKFVVAKKADSLYPVVSGASIVAKVTRDHALKGWVLGETAEKMHRNFGSGYPGDPETKAWLEDHKHSVFGFPTLVRFSWGTCNPFFKNMVEVLWECDNEDEEDQCLNGSIGKKQLKLSNVGFTSSRRKSEEVESNARGRCKFFQARKLEQLTRF 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3748823 3757109 + Bda011907.1 Bda15g00131 21826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00131 299 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Bda15g00131 299 PANTHER RIBONUCLEASE H2 SUBUNIT A 7 299 IPR001352 GO:0003723|GO:0004523
Bda15g00131 299 PANTHER RIBONUCLEASE 7 299 - -
Bda15g00131 299 Gene3D - 3 186 IPR036397 GO:0003676
Bda15g00131 299 TIGRFAM TIGR00729: ribonuclease HII 16 228 IPR004649 GO:0004523|GO:0016070
Bda15g00131 299 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Bda15g00131 299 SUPERFAMILY Ribonuclease H-like 15 232 IPR012337 -
Bda15g00131 299 Gene3D Ribonuclease hii. Domain 2 187 234 IPR023160 GO:0004523
Bda15g00131 299 CDD RNase_HII_eukaryota_like 17 236 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00131 K10743 - csin:114322663 514.227