Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00140 | ATGGAGCAGTACGAGAAGGTCGAAAAAATTGGTGAAGGTACCTATGGCGTCGTTTACAAGGCTCGTGATCGCGTCACTAATGAGACAATTGCTTTGAAGAAGATTCGCTTGGAGCAGGAAGATGAGGGAGTTCCAAGCACGGCAATAAGAGAAATTTCACTCTTGAAAGAAATGCAGCATGGAAACATTGTTAGGTTACAGGATGTAGTGCACAGTGAAAAGCGTTTATATCTTGTTTTTGAGTACCTGGACCTGGATCTGAAAAAGCACATGGATTCCTCTCCAGAATTTGCCAAGGATCTGCGTCAAATTAAAATGTTCCTTTACCAAATTCTTCGTGGTATTGCTTACTGTCATTCTCATAGAGTTCTTCATAGAGATCTGAAACCTCAAAACTTGCTGATAGACAGACGTACCAACGCACTGAAGCTTGCTGATTTTGGACTGGCTAGAGCATTTGGTATTCCTGTTAGGACATTTACACATGAGGTTGTGACTCTCTGGTACAGAGCTCCAGAAATATTGCTTGGGTCCCGCCACTACTCCACCCCTGTTGATGTGTGGTCTGTTGGTTGTATATTTGCTGAAATGCTAAATCAAAAGCCATTATTCCCTGGGGATTCCGAGATTGATGAATTGTTTAAGATATTCAGAGTTTTAGGCACTCCAAATGACGAAACTTGGCCTGGAGTGACTTCATTGCCCGATTTTAAATCTGCCTTCCCGAAGTGGCTTTCTCAGGACATGGCTTCTGTTGTTCCAACTCTTGAATCAACTGGTGTTGATCTTCTTTCTAAAATGCTCTGCTTGGATCCCACCAAACGAATTACAGCCAGGAGCGCTCTCGAGCATGAATACTTTAAAGACGTCACGTTTGTGCCCTGA | 885 | 43.05 | MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDLRQIKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMLNQKPLFPGDSEIDELFKIFRVLGTPNDETWPGVTSLPDFKSAFPKWLSQDMASVVPTLESTGVDLLSKMLCLDPTKRITARSALEHEYFKDVTFVP | 294 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 3843627 | 3847003 | - | Bda011917.1 | Bda15g00140 | 21835 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00140 | 294 | CDD | STKc_CDK1_CdkB_like | 4 | 287 | - | - | |
Bda15g00140 | 294 | Gene3D | Transferase(Phosphotransferase) domain 1 | 86 | 292 | - | - | |
Bda15g00140 | 294 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 84 | - | - | |
Bda15g00140 | 294 | SMART | serkin_6 | 4 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda15g00140 | 294 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 291 | - | - | |
Bda15g00140 | 294 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 291 | IPR011009 | - | |
Bda15g00140 | 294 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524 | |
Bda15g00140 | 294 | Pfam | Protein kinase domain | 4 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda15g00140 | 294 | PANTHER | CYCLIN-DEPENDENT KINASE A-2 | 1 | 291 | - | - | |
Bda15g00140 | 294 | ProSiteProfiles | Protein kinase domain profile. | 4 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda15g00140 | 294 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 123 | 135 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda15g00140 | Bda-Chr15:3843627 | Bda02g00600 | Bda-Chr2:46856943 | 8.93E-87 | dispersed | |
Bda01g00078 | Bda-Chr1:12078676 | Bda15g00140 | Bda-Chr15:3843627 | 1.11E-122 | transposed | |
Bda01g02188 | Bda-Chr1:57847805 | Bda15g00140 | Bda-Chr15:3843627 | 2.64E-90 | transposed | |
Bda07g00139 | Bda-Chr7:1727290 | Bda15g00140 | Bda-Chr15:3843627 | 1.81E-66 | transposed | |
Bda10g00416 | Bda-Chr10:36417401 | Bda15g00140 | Bda-Chr15:3843627 | 1.52E-70 | transposed | |
Bda14g00385 | Bda-Chr14:2781591 | Bda15g00140 | Bda-Chr15:3843627 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
70092 | PF00069 | Pkinase | 2.20E-81 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00140 | K02206 | - | mnt:21397004 | 569.311 |