Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00140 ATGGAGCAGTACGAGAAGGTCGAAAAAATTGGTGAAGGTACCTATGGCGTCGTTTACAAGGCTCGTGATCGCGTCACTAATGAGACAATTGCTTTGAAGAAGATTCGCTTGGAGCAGGAAGATGAGGGAGTTCCAAGCACGGCAATAAGAGAAATTTCACTCTTGAAAGAAATGCAGCATGGAAACATTGTTAGGTTACAGGATGTAGTGCACAGTGAAAAGCGTTTATATCTTGTTTTTGAGTACCTGGACCTGGATCTGAAAAAGCACATGGATTCCTCTCCAGAATTTGCCAAGGATCTGCGTCAAATTAAAATGTTCCTTTACCAAATTCTTCGTGGTATTGCTTACTGTCATTCTCATAGAGTTCTTCATAGAGATCTGAAACCTCAAAACTTGCTGATAGACAGACGTACCAACGCACTGAAGCTTGCTGATTTTGGACTGGCTAGAGCATTTGGTATTCCTGTTAGGACATTTACACATGAGGTTGTGACTCTCTGGTACAGAGCTCCAGAAATATTGCTTGGGTCCCGCCACTACTCCACCCCTGTTGATGTGTGGTCTGTTGGTTGTATATTTGCTGAAATGCTAAATCAAAAGCCATTATTCCCTGGGGATTCCGAGATTGATGAATTGTTTAAGATATTCAGAGTTTTAGGCACTCCAAATGACGAAACTTGGCCTGGAGTGACTTCATTGCCCGATTTTAAATCTGCCTTCCCGAAGTGGCTTTCTCAGGACATGGCTTCTGTTGTTCCAACTCTTGAATCAACTGGTGTTGATCTTCTTTCTAAAATGCTCTGCTTGGATCCCACCAAACGAATTACAGCCAGGAGCGCTCTCGAGCATGAATACTTTAAAGACGTCACGTTTGTGCCCTGA 885 43.05 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDLRQIKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMLNQKPLFPGDSEIDELFKIFRVLGTPNDETWPGVTSLPDFKSAFPKWLSQDMASVVPTLESTGVDLLSKMLCLDPTKRITARSALEHEYFKDVTFVP 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3843627 3847003 - Bda011917.1 Bda15g00140 21835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00140 294 CDD STKc_CDK1_CdkB_like 4 287 - -
Bda15g00140 294 Gene3D Transferase(Phosphotransferase) domain 1 86 292 - -
Bda15g00140 294 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Bda15g00140 294 SMART serkin_6 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00140 294 PANTHER CELL DIVISION PROTEIN KINASE 1 291 - -
Bda15g00140 294 SUPERFAMILY Protein kinase-like (PK-like) 1 291 IPR011009 -
Bda15g00140 294 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Bda15g00140 294 Pfam Protein kinase domain 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00140 294 PANTHER CYCLIN-DEPENDENT KINASE A-2 1 291 - -
Bda15g00140 294 ProSiteProfiles Protein kinase domain profile. 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00140 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00140 Bda-Chr15:3843627 Bda02g00600 Bda-Chr2:46856943 8.93E-87 dispersed
Bda01g00078 Bda-Chr1:12078676 Bda15g00140 Bda-Chr15:3843627 1.11E-122 transposed
Bda01g02188 Bda-Chr1:57847805 Bda15g00140 Bda-Chr15:3843627 2.64E-90 transposed
Bda07g00139 Bda-Chr7:1727290 Bda15g00140 Bda-Chr15:3843627 1.81E-66 transposed
Bda10g00416 Bda-Chr10:36417401 Bda15g00140 Bda-Chr15:3843627 1.52E-70 transposed
Bda14g00385 Bda-Chr14:2781591 Bda15g00140 Bda-Chr15:3843627 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70092 PF00069 Pkinase 2.20E-81 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00140 K02206 - mnt:21397004 569.311