Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00151 | ATGCTGAATCTCCAATCTAAGAACCAAGCTAACCCATCCTGCCTCACCGGGAACCCAATAGATGACTGCTGGCGGTGCGACCAAAACTGGCGAACAAACCGGCAAAGGCTCGCCGATTGCGGCATTGGGTTCGGCCAAGACGCCATGGGAGGAAAAGGAGGCCAGATCTACACGGTCACCGACTCTTCAGATTCAAATCCAGCGAACCCCACTCCGGGAACTCTACGGTACGCTGTCATCCAAGACGAACCCCTCTGGATCATCTTCTCCGCCGACATGACCATCAACCTAAAACACGAGCTCATCTTCAACAGCTTCAAAACCATCGATGGCCGCGGAGCCAACGTTCACATCACCGGCGGCGGGTGCATCACCCTTCAGTATGTCTCAAACGTAATAATCCACAACATCAACATCCACCATTGTAGGCCAACTGGAAATACCAACATACGGTCGAGTCCAACCCAAATCCAGCACCGTAGCATATCAGACGGCGACGGCATCTCCATCTTCGGCTCGCGCAAAATCTGGATTGACCATTGCTCACTCTCGTACTGCAAAGACGGTCTGATCGACACAGTAATGGGGTCCACCGGAATAACAATATCGAACAACTACTTCTCGCATCATGATGAGGTGATGCTGTTGGGCCACGACGATAAGTATGAACCAGATTCTGGGATGCAGGTGACCATAGCTTTCAATCACTTCGGTGTAGCGCTGGTACAACGTATGCCTCGGTGTAGACGAGGGTACATACACGTTGTGAATAATGATTTCACGGAGTGGGAGATGTATGCCATCGGCGGTAGTGCCAACCCTACCATAAACAGTCAGGGAAATAGATACACTGCTCCGGCGGACACTAATGCCAAAGAGGTGACGAGGCGTTTGGACACCGGAGAAGTGGAGTGGACGGATTGGAACTGGAGGACGGTGGGTGACATACTGGCGAACGGAGCATTCTTCGTTCCTTCCGGTGTTGGTCTCAGCAGTCTCTACTCTAAAGCTTACAGTGTCGACCCCAAATCAGCTGGTCTGATTGACCAGATAACCATCAACGCCGGTGCGTTTGGTGGGCCCAGAGATAATAGTAAGAGCACCGGATATGGCAGTGCCACGGCCAATAATCAGGGAACGACCACCGGCGACGACGGAGACATTTTTGGAATGATCTTCCGGGGTGCTGTTAGCGGCGCACTTGGCCGACGACTATCATGGGTTAACTCTATATTCCAATATCTTGTAATTCTCTTAACTTTGAGCAACATTACCCATTTTGCTTCTCTATTTTTCTCTCAGTTGCCATTGGGTTTGTAG | 1320 | 51.06 | MLNLQSKNQANPSCLTGNPIDDCWRCDQNWRTNRQRLADCGIGFGQDAMGGKGGQIYTVTDSSDSNPANPTPGTLRYAVIQDEPLWIIFSADMTINLKHELIFNSFKTIDGRGANVHITGGGCITLQYVSNVIIHNINIHHCRPTGNTNIRSSPTQIQHRSISDGDGISIFGSRKIWIDHCSLSYCKDGLIDTVMGSTGITISNNYFSHHDEVMLLGHDDKYEPDSGMQVTIAFNHFGVALVQRMPRCRRGYIHVVNNDFTEWEMYAIGGSANPTINSQGNRYTAPADTNAKEVTRRLDTGEVEWTDWNWRTVGDILANGAFFVPSGVGLSSLYSKAYSVDPKSAGLIDQITINAGAFGGPRDNSKSTGYGSATANNQGTTTGDDGDIFGMIFRGAVSGALGRRLSWVNSIFQYLVILLTLSNITHFASLFFSQLPLGL | 439 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 4087033 | 4088631 | + | Bda011930.1 | Bda15g00151 | 21846 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00151 | 439 | PANTHER | PECTATE LYASE 18-RELATED | 4 | 377 | IPR045032 | GO:0030570 | |
Bda15g00151 | 439 | Gene3D | - | 17 | 359 | IPR012334 | - | |
Bda15g00151 | 439 | Pfam | Pectate lyase | 100 | 281 | IPR002022 | - | |
Bda15g00151 | 439 | SMART | amb_all | 92 | 289 | IPR002022 | - | |
Bda15g00151 | 439 | PRINTS | Pollen allergen Amb family signature | 40 | 57 | IPR018082 | - | |
Bda15g00151 | 439 | PRINTS | Pollen allergen Amb family signature | 64 | 89 | IPR018082 | - | |
Bda15g00151 | 439 | PRINTS | Pollen allergen Amb family signature | 337 | 360 | IPR018082 | - | |
Bda15g00151 | 439 | PRINTS | Pollen allergen Amb family signature | 244 | 263 | IPR018082 | - | |
Bda15g00151 | 439 | PRINTS | Pollen allergen Amb family signature | 100 | 116 | IPR018082 | - | |
Bda15g00151 | 439 | PRINTS | Pollen allergen Amb family signature | 266 | 285 | IPR018082 | - | |
Bda15g00151 | 439 | PRINTS | Pollen allergen Amb family signature | 308 | 332 | IPR018082 | - | |
Bda15g00151 | 439 | PRINTS | Pollen allergen Amb family signature | 164 | 185 | IPR018082 | - | |
Bda15g00151 | 439 | SUPERFAMILY | Pectin lyase-like | 10 | 357 | IPR011050 | - | |
Bda15g00151 | 439 | PANTHER | PECTATE LYASE | 4 | 377 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda15g00151 | Bda-Chr15:4087033 | Bda12g00688 | Bda-Chr12:33372667 | 3.82E-175 | dispersed | |
Bda14g00053 | Bda-Chr14:450586 | Bda15g00151 | Bda-Chr15:4087033 | 0 | wgd | |
Bda14g00368 | Bda-Chr14:2672466 | Bda15g00151 | Bda-Chr15:4087033 | 0 | wgd | |
Bda15g00151 | Bda-Chr15:4087033 | Bda03g00722 | Bda-Chr3:6094621 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00151 | K01728 | - | zju:107413230 | 634.795 |