Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00163 ATGGAGTATCCGAGCTGCAACAATGGCGGAGAAGAACCCATGAGCCTCTGCAAAGCAGCGGACCCTTTGAACTGGGGGGCTGCAGCGGAGGGGCTGAGAGGGAGCCACTTGGAGGAGGTGAAGCGGATGGTGGAGGAATATCGGAAGGCGGAAGTTCGGCTGGGCGGCGAGACGCTGACGATAGGTCAAGTGGCAGCCATTGCGGCCACTGAGGGGGCGGTGAAAGTGGAGCTTTCGGAAGAGACGAGGGGGCGAGTGAAGGCTAGCAATGAATGGGTGCTTGAGAGCATGAACAAGGGGACTGATAGCTATGGCGTCACAACTGGCTTTGGTGCAACCTCCCACAGACGGACCAAGCAGGGTGGTGCTCTTCAAAAGGAGCTTATCAGGTTTTTGAACGCTGGAATTTTTGGAAATGAAAGAGAAAATAGACAAACGCTGCCTCACACGGTGACCAGAGCAGCAATGTTGGTGAGAATCAACACCCTTCTACAGGGCTACTCAGGCATCAGATTTGAGATTCTCGAAGCCATTACTAAGCTCCTTAACCACAACATCACTCCTTGTCTTCCTCTCCGAGGCACCATTACTGCTTCTGGAGATTTAGTTCCTCTCTCCTACATTGCAGGGCTGTTGACGGGAAGGCCAAACTCAAAAGCCGTTGGACCAAAAGGGGAGACTCTCACTGCTTCTGAGGCCTTTCAGCTGGCTGAGATAAGTGGAGGCTTTTTCGAGCTGCAGCCGAAAGAGGGTCTTGCTCTTGTCAACGGCACGGCAGTTGGGTCTGGTTTAGCTTCCATGGTTCTTTTCGAGACCAACATTTTGGCGATTCTTGCCGAGGTTATATCAGCCATTTTCGCGGAAGTTATGCAAGGAAAGCCAGAATTTACCGATCATTTGACGCATAAATTGAAGCATCATCCCGGCCAAATCGAAGCTGCAGCCATAATGGAGCACATTTTAGATGGCAGCTCTTACGTTAAATCAGCTCAGAAAGTCCATGAAATTGATCCCCTCCAAAAGCCAAAGCAAGATAGATATGCTCTGAGAACATCTCCCCAATGGCTCGGACCTCTAATCGAAGTTATCCGAATGGCCACCAAGATGATCGAAAGGGAAATCAACTCCGTCAATGATAACCCGTTGATCGACGTTTCCAGAAACAAGGCTTTGCACGGGGGGAATTTCCAAGGGACTCCAATTGGCGTCTCGATGGATAATACTCGCCTAGCTATCGCTTCGATCGGAAAGCTTTTGTTCGCTCAATTTTCCGAGCTGGTCAACGACTTCTACAACAATGGGCTGCCTTCAAATCTCTCGGCCGGTCGTAATCCGAGCTTGGATTACGGATTCAAAGGTGCTGAAATAGCCATGGCGTCTTACTGCTCAGAGCTTCAATTCTTGGCCAATCCAGTCACAAACCATGTGCAAAGCGCAGAGCAACACAACCAAGACGTGAACTCTCTGGGCTTAATTTCTGCAAGAAAAACAGCCGAAGCAGTAGAAATATTAAAGCTCATGTCGTCAACTTTCTTAGTGGCATTATGTCAAGCAGTTGATCTGCGCCACTTAGAGGAAAACCTGAAGAATGCAGTGAAGAACACAGTCGGCCAAGTATCAAAGAAGGTCTTAATAATGGGTTTTAGTGGAGAACTCCACCCAATCAGATTCTGCGAAAAAGACTTACTCAAAGTCGTAGAAAGAGAATATGTCTATTCCTACATTGACGACCCTTGCAGCGCTACATACCCATTAATCCAAAAACTCAGACAAGTTTTGGTAGACCAAGCTCTCAGCAATGGCGACAGAGAGAGATATTCAAGCACGTCCATTTTCCAGAAAATCGGAGCTTTTGAGGAAGAGCTGAGGACCCTCTTGCCTAAAGAGGTGGAAAGCGCGAGGCAAGAGTACGAAAATGGAAACTCAGCGATTCAAAACCAGATCAAGGAGTGCAGATCGTACCCATTGTACAAGTTCGTGAGAGAAACATTGGGGACGGAGCTTCTGACCGGAGAGGAAGTTAGATCGCCCGGCGAAGAATTCGACAAAGTTTTCTCTGCAATTTGTGATGGGAAACTGATCGATCCATTGCTGGAGTGTTTGAAAGAGTGGAACGGTGCTCCTCTTCCTATATGTTAA 2139 48.43 MEYPSCNNGGEEPMSLCKAADPLNWGAAAEGLRGSHLEEVKRMVEEYRKAEVRLGGETLTIGQVAAIAATEGAVKVELSEETRGRVKASNEWVLESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNERENRQTLPHTVTRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPKGETLTASEAFQLAEISGGFFELQPKEGLALVNGTAVGSGLASMVLFETNILAILAEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKSAQKVHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRMATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLLFAQFSELVNDFYNNGLPSNLSAGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMSSTFLVALCQAVDLRHLEENLKNAVKNTVGQVSKKVLIMGFSGELHPIRFCEKDLLKVVEREYVYSYIDDPCSATYPLIQKLRQVLVDQALSNGDRERYSSTSIFQKIGAFEEELRTLLPKEVESARQEYENGNSAIQNQIKECRSYPLYKFVRETLGTELLTGEEVRSPGEEFDKVFSAICDGKLIDPLLECLKEWNGAPLPIC 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4189266 4192096 - Bda011944.1 Bda15g00163 21858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00163 712 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 17 712 - -
Bda15g00163 712 Gene3D Fumarase/aspartase (Central domain) 259 707 - -
Bda15g00163 712 CDD PAL-HAL 57 522 IPR001106 -
Bda15g00163 712 Gene3D - 525 646 IPR023144 -
Bda15g00163 712 Coils Coil 630 650 - -
Bda15g00163 712 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 194 210 IPR022313 GO:0016841
Bda15g00163 712 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 21 702 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bda15g00163 712 SUPERFAMILY L-aspartase-like 21 712 IPR008948 GO:0003824
Bda15g00163 712 Pfam Aromatic amino acid lyase 59 534 IPR001106 -
Bda15g00163 712 PANTHER HISTIDINE AMMONIA-LYASE 17 712 IPR001106 -
Bda15g00163 712 Gene3D - 14 258 IPR024083 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00352 Bda15g00163 CCT
Bda14g00352 Bda15g00163 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00740 Bda-Chr3:6281911 Bda15g00163 Bda-Chr15:4189266 0 dispersed
Bda01g00298 Bda-Chr1:27905124 Bda15g00163 Bda-Chr15:4189266 6.79E-06 wgd
Bda14g00352 Bda-Chr14:2581706 Bda15g00163 Bda-Chr15:4189266 0 wgd
Bda15g00163 Bda-Chr15:4189266 Bda03g00739 Bda-Chr3:6273362 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00163 K10775 - pop:7479878 1199.88