Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00170 ATGGCTTCCAACACCTTGATGAGCTGCGGAATTACAGCAGTGGCCTACCCGTCCGTCCTCTCGTCGTCCAAATCGAAGTTTGCCGCCGCATTTTCACTTCCTTCCGGCTATGCCAATGCGTCGTCGCGCTTCTCCATGTCAGCCAAGTGGATGCCCGGCCAGCCCAGACCTCCATACCTGGATGGCTCAGCTCCGGGAGATTTTGGGTTTGACCCACTTGGATTGGGGGAAGTTCCAGAGAATCTGGAGAGATTCAAAGAGTCTGAACTCATCCATTGCAGATGGGCTATGCTCGCCGTTCCAGGGGTCCTACTTCCAGAGGCATTGGGGTTAGGCAACTGGGTGAAGGCCCAAGAGTGGGCGGCAATTCCCGGCGGCCAAGCCACCTACCTGGGGCAGCCAGTTCCTTGGGGTACATTACCCATAATTTTGGTCATCGAGTTCCTCGCCATTGATTTCGTAGAGCACCAACGCAGCATGGAAAAAGATACAGAAAAGAAGAAATACCCCGGCGGCGCATTTGATCCCCTGGGCTTCTCCAAAGACCCTGCAAAGTTCGAGGAATACAAAGTCAAAGAGATTAAAAATGGTCGGCTGGCGCTGCTGGCATTTGTTGGGTTCTGTGTGCAGCAATCGGCCTACCCAGGCACAGGGCCATTGGAGAACTTGGCCACTCACTTTGCTGACCCATGGCACAACAACATCGGCGATATCATCATTCCAAGAGGGGTTTTGGCTTGA 741 53.85 MASNTLMSCGITAVAYPSVLSSSKSKFAAAFSLPSGYANASSRFSMSAKWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGVLLPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPIILVIEFLAIDFVEHQRSMEKDTEKKKYPGGAFDPLGFSKDPAKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHFADPWHNNIGDIIIPRGVLA 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4252509 4253662 - Bda011952.1 Bda15g00170 21865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00170 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Bda15g00170 246 SUPERFAMILY Chlorophyll a-b binding protein 39 240 - -
Bda15g00170 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Bda15g00170 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 237 IPR001344 GO:0009765|GO:0016020
Bda15g00170 246 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 22 237 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00345 Bda15g00170 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00930 Bda-Chr5:57875719 Bda15g00170 Bda-Chr15:4252509 5.89E-44 dispersed
Bda07g01019 Bda-Chr7:12003057 Bda15g00170 Bda-Chr15:4252509 2.64E-45 dispersed
Bda15g00170 Bda-Chr15:4252509 Bda11g00909 Bda-Chr11:8906510 2.84E-40 dispersed
Bda15g00608 Bda-Chr15:9272694 Bda15g00170 Bda-Chr15:4252509 8.44E-39 dispersed
Bda14g00345 Bda-Chr14:2494774 Bda15g00170 Bda-Chr15:4252509 1.31E-142 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00170 K08907 - pvy:116130060 456.832