Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00172 ATGGCTGAGGTTCCTAACCGTACTATGGAAGAGACGCCTACATGGGCGGTCGCCGTAATTTGCTTTGTACTCATCGTTATATCAATCTTTATCGAACACATCATTCACCTCATAGGAAAGTGGTTGACGAAGAAACACAAAGCAGCTCTTTATGAAGCTCTAGAAAAGGTCAAAGCAGAGCTTATGCTTCTGGGATTTATATCCTTGCTGCTAACAGTATTACAGAGTCCCATCTCTCAAATCTGTATTTCTAAGAAAGTTGGAAACACTTGGCTTCCTTGTAGCTCAGAAGATATTCAGAAAAAAGCAGCAGCCAAAGGTGGAAGGAGACTTCTTCAATTTCTAGGCTCTGGATCGAGTCCTAGAAGAATATTAGCCGCGAAGGGATATGATAACTGCGCTGAACAGGGTAAAGTAGCTTTTATGTCTGCTTATGCTATTCACCAGCTTCATATCTTCATCTTTGTGTTAGCTGCTTTCCATGTCCTTTACTGCATTACAACTTTGGCTTTGGGTAGAACAAAGATGAGAAAGTGGAAGGGATGGGAGGATGAAACAAAGACAATAGAATACCAATACTACAATGATCCTGCAAGGTTTCGGTTTGCGAGAGATACAACATTCGGCCGCCGACACTTGAGCACTTGGAGTCGTACAACAGTATCTATTTGGATAGTTTGTTTCTTCAGACAGTTCTTCAGATCCGTCACTAAAGTAGATTACCTGACATTAAGACACGGATTCATCATGGCGCATTTGGCCCCGGGAAGTGAAACCAGGTTCGACTTTCAAAATTACATAAACAGATCTCTGGAAGAGGATTTCAAAGTAGTGGTGGGAATCAGCCCGGCTATGTGGTTATGTGCTGTTCTGTTCCTCATAACCAATGCATACGGATGGCATACATATCTATGGCTTCCATTTATATCTTTGATTATTATTCTGCTAGTGGGAACTAAGCTACAAGTGATTATTACAAAGCTGGGGTTGAGAATCCAAGAGAGGGGCGATGTGGTGAAGGGTGCCCCCGTGGTTCAGCCGGGCGATGATCTTTTCTGGTTCGGTCGCCCTCGGTTCATGCTCTTTTTGATCAACTTCGTTCTTTTTCAGAATGCATTTCAACTCGCCTTCTTCGTATGGAGCACATTAACATTTGGTTTTAGATCTTGCTTTCACAAAAACACGGAAGATATCGTCATCAGGGTCTCGCTCGGGATCATTATACAAGTTCTTTGCAGCTATGTAACCCTCCCTCTCTATGCTCTTGTCACTCAGATGGGTTCTACCATGAGACCGACCATTTTCAACGACCGGGTTGCGGCTGCTCTGAAGAATTGGCACCACTCGGCCAAGAAAAACACGAGACACCACCGCAACTCTGAGTCGAACACGCCCTTATCCAGTCGACCGGGAACTCCATCTCACGGCATGTCTCCCATGCATCCTTCTCCACAACTACAATCAAAGCAGCACCTCTCCTCGGTTATCCGATGTTGA 1497 44.42 MAEVPNRTMEETPTWAVAVICFVLIVISIFIEHIIHLIGKWLTKKHKAALYEALEKVKAELMLLGFISLLLTVLQSPISQICISKKVGNTWLPCSSEDIQKKAAAKGGRRLLQFLGSGSSPRRILAAKGYDNCAEQGKVAFMSAYAIHQLHIFIFVLAAFHVLYCITTLALGRTKMRKWKGWEDETKTIEYQYYNDPARFRFARDTTFGRRHLSTWSRTTVSIWIVCFFRQFFRSVTKVDYLTLRHGFIMAHLAPGSETRFDFQNYINRSLEEDFKVVVGISPAMWLCAVLFLITNAYGWHTYLWLPFISLIIILLVGTKLQVIITKLGLRIQERGDVVKGAPVVQPGDDLFWFGRPRFMLFLINFVLFQNAFQLAFFVWSTLTFGFRSCFHKNTEDIVIRVSLGIIIQVLCSYVTLPLYALVTQMGSTMRPTIFNDRVAAALKNWHHSAKKNTRHHRNSESNTPLSSRPGTPSHGMSPMHPSPQLQSKQHLSSVIRC 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4266461 4270157 - Bda011954.1 Bda15g00172 21867

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00172 498 MobiDBLite consensus disorder prediction 450 498 - -
Bda15g00172 498 MobiDBLite consensus disorder prediction 460 498 - -
Bda15g00172 498 Pfam Mlo family 7 482 IPR004326 GO:0006952|GO:0016021
Bda15g00172 498 PANTHER MLO-LIKE PROTEIN 5 483 - -
Bda15g00172 498 PANTHER MLO-LIKE PROTEIN 1 5 483 IPR004326 GO:0006952|GO:0016021
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00172 K08472 MLO; mlo protein - jre:108980000 746.888
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda14g00343 Bda15g00172 CCT
Bda14g00343 Bda15g00172 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00205 Bda-Chr4:7722085 Bda15g00172 Bda-Chr15:4266461 5.00E-167 dispersed
Bda09g00184 Bda-Chr9:2675516 Bda15g00172 Bda-Chr15:4266461 1.30E-166 dispersed
Bda10g00277 Bda-Chr10:30385723 Bda15g00172 Bda-Chr15:4266461 4.29E-174 dispersed
Bda14g00972 Bda-Chr14:7831133 Bda15g00172 Bda-Chr15:4266461 6.96E-102 dispersed
Bda02g00508 Bda-Chr2:45987101 Bda15g00172 Bda-Chr15:4266461 6.83E-168 transposed
Bda14g00343 Bda-Chr14:2465693 Bda15g00172 Bda-Chr15:4266461 0 wgd
Bda15g00172 Bda-Chr15:4266461 Bda02g00768 Bda-Chr2:48423299 0 wgd
Bda15g00172 Bda-Chr15:4266461 Bda07g00625 Bda-Chr7:7617183 1.53E-165 wgd
Bda15g00172 Bda-Chr15:4266461 Bda09g01468 Bda-Chr9:46495003 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi13g491 . . . Bda15g00172 . . Bma03g00332 . . Cmo04g01433 Cma04g01359 . Car04g01437 . . . . . . . . . . . Cla05g02133 Cam05g2289 Cec05g2309 Cco05g2351 Clacu05g2283 Cmu05g2147 Cre05g2268 . . . . . . . Cme10g00061 Blo13g00727 . Bda14g00343 . Bpe04g01877 . . Bma08g00944 . . . . . . . Cpe01g01228 . . . . . . . . . . . . . . . Lsi04g00059 . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda07g00291 . 3 530 MLO family AT5G53760 66.4 5.5e-203 704.1
Bda09g00184 CCT,ECH 13 433 MLO family AT3G45290 58.8 6.9e-141 497.7
Bda07g00625 BCT,CCT,ECH 13 444 MLO family AT3G45290 57.2 4.3e-135 478.4
Bda07g00291 . 3 530 MLO family AT1G26700 64.1 3.5e-191 664.8
Bda15g00172 CCT,ECH 4 481 MLO family AT2G39200 71.4 4.8e-199 691.0
Bda14g00343 CCT,ECH 5 536 MLO family AT2G39200 65.3 6.5e-196 680.6
Bda09g01468 CCT,ECH 9 525 MLO family AT2G39200 63.8 1.0e-185 646.7
Bda09g00185 BCT,CCT,ECH 8 575 MLO family AT2G39200 57.2 1.7e-180 629.4
Bda02g00768 CCT,ECH 9 561 MLO family AT2G39200 58.9 8.0e-178 620.5
Bda01g01568 . 29 478 MLO family AT2G39200 51.1 1.0e-124 444.1
Bda15g00172 CCT,ECH 3 405 MLO family AT1G61560 68.3 5.8e-162 567.4
Bda14g00343 CCT,ECH 1 417 MLO family AT1G61560 67.1 9.5e-157 550.1
Bda09g01468 CCT,ECH 9 415 MLO family AT1G61560 65.2 3.2e-152 535.0
Bda02g00768 CCT,ECH 9 466 MLO family AT1G61560 59.8 1.9e-149 525.8
Bda09g00185 BCT,CCT,ECH 8 475 MLO family AT1G61560 57.8 1.3e-145 513.1
Bda10g00277 CCT,ECH 28 415 MLO family AT1G61560 53.2 6.7e-118 421.0
Bda01g01568 . 29 420 MLO family AT1G61560 51.5 1.7e-113 406.4
Bda10g00277 CCT,ECH 10 465 MLO family AT2G17430 68.6 8.3e-177 617.1
Bda04g00205 . 10 471 MLO family AT2G17430 63.9 2.7e-167 585.5
Bda01g01568 . 26 484 MLO family AT2G17430 61.8 5.1e-158 554.7
Bda10g00277 CCT,ECH 1 561 MLO family AT2G17480 63.0 1.1e-193 673.3
Bda04g00205 . 4 534 MLO family AT2G17480 61.7 1.5e-179 626.3
Bda01g01568 . 29 483 MLO family AT2G17480 64.0 2.6e-163 572.4
Bda01g01568 . 29 385 MLO family AT1G42560 65.2 6.8e-133 470.7
Bda10g00277 CCT,ECH 28 380 MLO family AT1G42560 58.6 2.9e-115 412.1
Bda04g00205 . 28 386 MLO family AT1G42560 57.3 5.0e-112 401.4
Bda09g01468 CCT,ECH 1 380 MLO family AT1G42560 51.9 8.9e-101 364.0
Bda08g00215 . 5 421 MLO family AT4G24250 54.0 2.6e-119 425.6
Bda08g00217 . 5 420 MLO family AT4G24250 52.8 3.3e-114 408.7
Bda10g00277 CCT,ECH 5 380 MLO family AT5G65970 69.7 3.2e-148 521.9
Bda04g00205 . 5 386 MLO family AT5G65970 64.7 7.4e-137 484.2
Bda01g01568 . 23 385 MLO family AT5G65970 62.9 4.8e-128 454.9
Bda09g01468 CCT,ECH 2 380 MLO family AT5G65970 50.9 4.6e-102 368.6
Bda01g01568 . 29 511 MLO family AT2G33670 65.4 2.0e-177 619.0
Bda10g00277 CCT,ECH 28 463 MLO family AT2G33670 63.4 9.1e-154 540.4
Bda04g00205 . 28 469 MLO family AT2G33670 61.9 9.4e-151 530.4
Bda09g01468 CCT,ECH 1 484 MLO family AT2G33670 50.2 7.0e-130 461.1
Bda15g00172 CCT,ECH 62 481 MLO family AT1G11310 69.7 6.9e-173 604.0
Bda14g00343 CCT,ECH 63 508 MLO family AT1G11310 64.7 5.6e-167 584.3
Bda09g01468 CCT,ECH 64 496 MLO family AT1G11310 64.2 4.3e-159 558.1
Bda02g00768 CCT,ECH 64 558 MLO family AT1G11310 57.3 1.7e-155 546.2
Bda09g00185 BCT,CCT,ECH 63 582 MLO family AT1G11310 55.2 9.6e-151 530.4
Bda02g00508 . 64 421 MLO family AT1G11310 50.4 1.9e-106 383.3
Bda01g01568 . 84 473 MLO family AT1G11310 51.3 6.1e-105 378.3
Bda08g00215 . 1 505 MLO family AT2G44110 58.2 6.5e-160 560.8
Bda08g00217 . 1 504 MLO family AT2G44110 58.4 1.5e-156 549.7
Bda08g00215 . 7 487 MLO family AT4G02600 71.6 1.3e-198 689.5
Bda08g00217 . 3 486 MLO family AT4G02600 71.2 2.7e-196 681.8
Bda03g00915 . 2 256 MLO family AT4G02600 54.3 1.5e-69 260.8
Bda08g00432 . 1 507 MLO family AT1G11000 70.1 2.6e-197 685.3
Bda11g01831 . 1 457 MLO family AT1G11000 53.3 5.4e-134 474.9
Bda08g00215 . 7 487 MLO family AT4G02600 71.6 1.3e-198 689.5
Bda08g00217 . 3 486 MLO family AT4G02600 71.2 2.7e-196 681.8
Bda03g00915 . 2 256 MLO family AT4G02600 54.3 1.5e-69 260.8
Bda15g00172 CCT,ECH 62 481 MLO family AT1G11310 69.7 6.9e-173 604.0
Bda14g00343 CCT,ECH 63 508 MLO family AT1G11310 64.7 5.6e-167 584.3
Bda09g01468 CCT,ECH 64 496 MLO family AT1G11310 64.2 4.3e-159 558.1
Bda02g00768 CCT,ECH 64 558 MLO family AT1G11310 57.3 1.7e-155 546.2
Bda09g00185 BCT,CCT,ECH 63 582 MLO family AT1G11310 55.2 9.6e-151 530.4
Bda02g00508 . 64 421 MLO family AT1G11310 50.4 1.9e-106 383.3
Bda01g01568 . 84 473 MLO family AT1G11310 51.3 6.1e-105 378.3
Bda09g00184 CCT,ECH 13 433 MLO family AT3G45290 58.8 6.9e-141 497.7
Bda07g00625 BCT,CCT,ECH 13 444 MLO family AT3G45290 57.2 4.3e-135 478.4
Bda08g00432 . 1 507 MLO family AT1G11000 70.1 2.6e-197 685.3
Bda11g01831 . 1 457 MLO family AT1G11000 53.3 5.4e-134 474.9
Bda01g01568 . 29 511 MLO family AT2G33670 65.4 2.0e-177 619.0
Bda10g00277 CCT,ECH 28 463 MLO family AT2G33670 63.4 9.1e-154 540.4
Bda04g00205 . 28 469 MLO family AT2G33670 61.9 9.4e-151 530.4
Bda09g01468 CCT,ECH 1 484 MLO family AT2G33670 50.2 7.0e-130 461.1
Bda15g00172 CCT,ECH 3 405 MLO family AT1G61560 68.3 5.8e-162 567.4
Bda14g00343 CCT,ECH 1 417 MLO family AT1G61560 67.1 9.5e-157 550.1
Bda09g01468 CCT,ECH 9 415 MLO family AT1G61560 65.2 3.2e-152 535.0
Bda02g00768 CCT,ECH 9 466 MLO family AT1G61560 59.8 1.9e-149 525.8
Bda09g00185 BCT,CCT,ECH 8 475 MLO family AT1G61560 57.8 1.3e-145 513.1
Bda10g00277 CCT,ECH 28 415 MLO family AT1G61560 53.2 6.7e-118 421.0
Bda01g01568 . 29 420 MLO family AT1G61560 51.5 1.7e-113 406.4
Bda10g00277 CCT,ECH 10 465 MLO family AT2G17430 68.6 8.3e-177 617.1
Bda04g00205 . 10 471 MLO family AT2G17430 63.9 2.7e-167 585.5
Bda01g01568 . 26 484 MLO family AT2G17430 61.8 5.1e-158 554.7
Bda10g00277 CCT,ECH 1 561 MLO family AT2G17480 63.0 1.1e-193 673.3
Bda04g00205 . 4 534 MLO family AT2G17480 61.7 1.5e-179 626.3
Bda01g01568 . 29 483 MLO family AT2G17480 64.0 2.6e-163 572.4
Bda01g01568 . 29 385 MLO family AT1G42560 65.2 6.8e-133 470.7
Bda10g00277 CCT,ECH 28 380 MLO family AT1G42560 58.6 2.9e-115 412.1
Bda04g00205 . 28 386 MLO family AT1G42560 57.3 5.0e-112 401.4
Bda09g01468 CCT,ECH 1 380 MLO family AT1G42560 51.9 8.9e-101 364.0
Bda10g00277 CCT,ECH 5 380 MLO family AT5G65970 69.7 3.2e-148 521.9
Bda04g00205 . 5 386 MLO family AT5G65970 64.7 7.4e-137 484.2
Bda01g01568 . 23 385 MLO family AT5G65970 62.9 4.8e-128 454.9
Bda09g01468 CCT,ECH 2 380 MLO family AT5G65970 50.9 4.6e-102 368.6
Bda07g00291 . 3 530 MLO family AT5G53760 66.4 5.5e-203 704.1
Bda15g00172 CCT,ECH 4 481 MLO family AT2G39200 71.4 4.8e-199 691.0
Bda14g00343 CCT,ECH 5 536 MLO family AT2G39200 65.3 6.5e-196 680.6
Bda09g01468 CCT,ECH 9 525 MLO family AT2G39200 63.8 1.0e-185 646.7
Bda09g00185 BCT,CCT,ECH 8 575 MLO family AT2G39200 57.2 1.7e-180 629.4
Bda02g00768 CCT,ECH 9 561 MLO family AT2G39200 58.9 8.0e-178 620.5
Bda01g01568 . 29 478 MLO family AT2G39200 51.1 1.0e-124 444.1
Bda08g00215 . 5 421 MLO family AT4G24250 54.0 2.6e-119 425.6
Bda08g00217 . 5 420 MLO family AT4G24250 52.8 3.3e-114 408.7
Bda07g00291 . 3 530 MLO family AT1G26700 64.1 3.5e-191 664.8
Bda08g00215 . 1 505 MLO family AT2G44110 58.2 6.5e-160 560.8
Bda08g00217 . 1 504 MLO family AT2G44110 58.4 1.5e-156 549.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005733 2 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 0 2 1 1 1 1 1 1 1 1 2 3 0 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda15g00172 Bda_Chr15 FPKM 9.210417 11.922071 9.977459 9.581345 13.043438 11.025602 15.432232 24.059216 25.698727