Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00176 ATGGGAAAGAAAGGAAGTTGGTTTTGCGCAGTGACTAAAGCTCTCGGTTCTGAGTCTAAGGAAAAGAAAGATCAGAAAACCCACAAAACAAAGAGAAAATGGTTTGGAAAGAATAAGAAAACAGATGTGATTACTTTTTTGGAAGAAACAACTCCACTGCCTCTTCCTTCGCCACTTCCAGCTCTAGAAGATGTGAAATTGACAAATGTTGAGAATGAACAAAGCAAGCACGCCTACTCTGTGGCACTTGCCACCGCAGCGGCAGCAGAGGCTGCTGTAGCGGCCGCTCAGGCAGCGGCCGAGGTTGTGCGTCTGACCACTATTCCCCGTTTCCTGGGAAAATCAAAAGATGAAATAGCAGCCATCAAAATTCAAACAGCATTTCGTGGACATTTGGCGAGAAGAGCTTTGCGAGCATTAAGAGGGCTTGTACGGTTGAAGATGTTGATGGAAGGGCCATCTGTGAAACGGCAAGTGGCTTCCTCGTTGAGATCCATGCAGACACTTGCACGTTTGCAATCGCAAATTCGTTCGAGGAGGCTGAGAATGTCGGAGGAGAATCAGGCTCTTCAGCTTCAACTTCAGCGGAAACACGAAAAAGAACTTGCGAAATTAAGAGCTTCTATTGGTGAAGAATGGGATGATAGAACACAGTCAAAGGAGCAAGTTGAAGCCAAAATACTCAACAAGCAAGAAGCTGCTTCGAGAAGAGAAAGGGCTCTAGCATATGCTTTCTCTCATCAGCAAACTTGGAAGAACTCTTCGAAATCAGCGAACCAAACGTTCATGGATCCGATCAACCCTCACTGGGGTTGGAGCTGGTTGGAGCGATGGATGGCTTCTCGGCCATGGGAGGCTAAAAACGTAATTGATTACCACGATCATATGACTCCAAATAACAGAGCTTCTATTGGAGACGCCAACAAAGCATATAGCCGTCGAGATCTCAACCTCGAACTCAAGAATTCCCTATGGACTCCGCCTAGCCAAAAGTCAAGCAGGCCTCCGAGCCGCCAGTCCCCGTCGACTCCTTCATCTTCATCTGTGTCGAGGAAAATAAAGCCGTCCAGCCCGAGAGGTAGCGGATGGGGTGGAGACCACGACTCTAGAAGTGTATATAGTGTCACTTCAGACAGGTGCCGGAGACACAGCATTGCAGGGTCATCAGTCAGAGACGATGAAAGTTTAGTCAGCTCGGCTTCAGTTCCGAGCTATATGGGAGCCACAGAGTCCGCAAAGGCAAAGTCTCGATTTTCAAGCCCTGCCGGAGTGGACAAAGCCAGTATGCCGGAGAAGGAATCGGCTGGTTATGTGAAGAAGAGGCTGTCTTTCTCGTCGTCCCCAGCCCCGCCGAGGAGGCATTCTGGCCCGCCCGTGACAGATACTTGTGCCGTTAATAATTCTTGA 1407 48.76 MGKKGSWFCAVTKALGSESKEKKDQKTHKTKRKWFGKNKKTDVITFLEETTPLPLPSPLPALEDVKLTNVENEQSKHAYSVALATAAAAEAAVAAAQAAAEVVRLTTIPRFLGKSKDEIAAIKIQTAFRGHLARRALRALRGLVRLKMLMEGPSVKRQVASSLRSMQTLARLQSQIRSRRLRMSEENQALQLQLQRKHEKELAKLRASIGEEWDDRTQSKEQVEAKILNKQEAASRRERALAYAFSHQQTWKNSSKSANQTFMDPINPHWGWSWLERWMASRPWEAKNVIDYHDHMTPNNRASIGDANKAYSRRDLNLELKNSLWTPPSQKSSRPPSRQSPSTPSSSSVSRKIKPSSPRGSGWGGDHDSRSVYSVTSDRCRRHSIAGSSVRDDESLVSSASVPSYMGATESAKAKSRFSSPAGVDKASMPEKESAGYVKKRLSFSSSPAPPRRHSGPPVTDTCAVNNS 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4321536 4323463 + Bda011959.1 Bda15g00176 21871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00176 468 MobiDBLite consensus disorder prediction 323 468 - -
Bda15g00176 468 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Bda15g00176 468 SMART iq_5 116 138 IPR000048 GO:0005515
Bda15g00176 468 Gene3D - 30 149 - -
Bda15g00176 468 MobiDBLite consensus disorder prediction 323 355 - -
Bda15g00176 468 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Bda15g00176 468 Pfam Protein of unknown function (DUF4005) 358 455 IPR025064 -
Bda15g00176 468 MobiDBLite consensus disorder prediction 391 406 - -
Bda15g00176 468 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 1 465 - -
Bda15g00176 468 PANTHER IQ-DOMAIN 5-RELATED 1 465 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01241 Bda-Chr5:60300088 Bda15g00176 Bda-Chr15:4321536 1.82E-123 dispersed
Bda09g00275 Bda-Chr9:3420580 Bda15g00176 Bda-Chr15:4321536 2.22E-41 dispersed
Bda10g00517 Bda-Chr10:38714627 Bda15g00176 Bda-Chr15:4321536 2.02E-123 dispersed
Bda15g00176 Bda-Chr15:4321536 Bda03g01731 Bda-Chr3:56756295 1.08E-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00176 - - vvi:100256490 513.072