Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00184 ATGGCGGAGGCTCCGACTAGTCCAGCCGGTGGGAGTCACGAGAGTGGCGGGGAGCAGAGTCCGGGTACCGTTGTGCGGGAACAAGATCGATATCTTCCGATCGCTAATATTAGCAGGATCATGAAGAAGGCGTTGCCTGCAAACGGAAAAATCGCTAAAGATGCCAAGGACACCGTCCAAGAATGTGTCTCTGAATTCATCAGCTTCATCACCAGCGAAGCGAGCGATAAGTGCCAGAAAGAGAAGAGGAAGACGATCAATGGTGACGATTTGTTGTGGGCAATGGCAACTTTAGGATTTGAGGACTATATTGATCCCCTTAAGGTGTATCTAAATAGATACAGAGAGTTTTGGCAGGGTGACGCTAAAGGGTCTGCTAGAGGTGGGGATGACTCTGCTAAACGAGATGCAGTTGGTGTCCTTCCTAATCCAAATTCACAGGTTTAG 447 48.99 MAEAPTSPAGGSHESGGEQSPGTVVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKVYLNRYREFWQGDAKGSARGGDDSAKRDAVGVLPNPNSQV 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4420974 4422213 - Bda011968.1 Bda15g00184 21879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00184 148 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Bda15g00184 148 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Bda15g00184 148 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Bda15g00184 148 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 1 147 - -
Bda15g00184 148 SUPERFAMILY Histone-fold 28 134 IPR009072 GO:0046982
Bda15g00184 148 MobiDBLite consensus disorder prediction 122 148 - -
Bda15g00184 148 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 147 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bda15g00184 148 Gene3D Histone, subunit A 22 138 IPR009072 GO:0046982
Bda15g00184 148 MobiDBLite consensus disorder prediction 1 26 - -
Bda15g00184 148 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Bda15g00184 148 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00336 Bda15g00184 CCT
Bda15g00184 Bda15g00376 CCT
Bda14g00336 Bda15g00184 ECH
Bda15g00376 Bda15g00184 ECH
Bda15g00184 Bda15g00376 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g00590 Bda-Chr13:6927795 Bda15g00184 Bda-Chr15:4420974 2.38E-59 dispersed
Bda14g01019 Bda-Chr14:8589455 Bda15g00184 Bda-Chr15:4420974 3.25E-52 dispersed
Bda15g00650 Bda-Chr15:9955655 Bda15g00184 Bda-Chr15:4420974 1.37E-17 dispersed
Bda14g00336 Bda-Chr14:2403587 Bda15g00184 Bda-Chr15:4420974 2.05E-80 wgd
Bda15g00184 Bda-Chr15:4420974 Bda15g00376 Bda-Chr15:6716276 1.84E-87 wgd
Bda15g00184 Bda-Chr15:4420974 Bda03g00753 Bda-Chr3:6355371 3.50E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17144 PF00808 CBFD_NFYB_HMF 4.00E-28 CL0012 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00184 K08065 - cpap:110824235 257.299