Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00189 ATGGTATCAGATACTTTGATGAAGATCGTATCGCCCTGCTGGAGACCTTCTGTTGAGGGTGAAAATTCTAGTAGAGGTGGAGACTCAAACCGCGGGAGGGTTGATGGGTTACTGTGGTATAAAGATTCTGGACGACACATGAATGGAGAATTCTCCATGGCAGTAATTCAAGCGAATAACTTACTGGAAGATCATAGCCAACTTGAATCAGGACCAGTGAGCCTTTCTGAATCAGGTCCTCTAGGAACATTTGTTGGTATTTACGATGGCCACGGAGGTCCAGAAGCTGCACAGTTCGTAAATGATCATCTTTTTAACTATATCAGGAGTATTTTTCTTCTACTTCCATTTTCATTGTCTAAGTTTAGATTGCCCCAGCCATTCGAGAAGCCGATTCTTAAAGCTGAGCCCACAATCTCTGTTGAGAAGCTTCATCCCGAAGATCAGTTTTTAATCTTTGCATCAGATGGCTTGTGGGAGTATCTAACCAATCAAGAGGCCGTTTCTAGATCTATTGGTGACGCCTATTTGAAGAAGGCGGAGTTCAATCGTGAGCCTTTATTGTCTAAGTTTAGATTGCCCCAGCCATTCGAGAAGCCGATTCTTAAAGCTGAGCCCACAATCTCTGTTGAGAAGCTTCATCCCGAAGATCAGTTTTTAATCTTTGCATCAGATGGCTTGTGGGAGTATCTAACCAATCAAGAGGCCGTTGATATTGTGCAGAGCTGCCCCCGTAATGGATTGCAGAATAAAATACAACTGGTTCCTATTGATCTGCAAGACAGGCCTGCTTGGTACAAGGACATGGTTTACCCAGCTAACAAGGTGCCATCACTGGAACACTCTAATGAAGTGAAGGGAGAAAGCCTTGATTTGATTAAGTATATTGATGAACACTTTGAAGGGCCGTCCCTATTTCCCAATGATCCGGAAAAGAGAGCATTTGGAGAAGAATTGCTTTCGTACACCGATTCCTTTAATAGATCCGTGATCTTTTCACTCAAAGGCGACGCAACCGAAGCTGATTCTGCATTTGAGTACATCGAATCTGCTCTTTCCAAGTTTGATGATGGACCATTCTTTCTCGGACAATTTAGCCTAGTGGATATAGCTTATGCCCCATTTGTTGAAAGATATCAGCCATTTTTATTAGAAGTGAAGAACTATGACATCACTGCTGGAAGACCTAATTTTGTGGTATGGATTGAGGAGATGAGCAAAAATGATGGTTACAGGCAAACTAAACGCGACCCGAAAGAGTTGGTTGAAGTTCTCAAAAGTCGATTCTTGGTAAGTTTTGGTTGA 1305 42.53 MVSDTLMKIVSPCWRPSVEGENSSRGGDSNRGRVDGLLWYKDSGRHMNGEFSMAVIQANNLLEDHSQLESGPVSLSESGPLGTFVGIYDGHGGPEAAQFVNDHLFNYIRSIFLLLPFSLSKFRLPQPFEKPILKAEPTISVEKLHPEDQFLIFASDGLWEYLTNQEAVSRSIGDAYLKKAEFNREPLLSKFRLPQPFEKPILKAEPTISVEKLHPEDQFLIFASDGLWEYLTNQEAVDIVQSCPRNGLQNKIQLVPIDLQDRPAWYKDMVYPANKVPSLEHSNEVKGESLDLIKYIDEHFEGPSLFPNDPEKRAFGEELLSYTDSFNRSVIFSLKGDATEADSAFEYIESALSKFDDGPFFLGQFSLVDIAYAPFVERYQPFLLEVKNYDITAGRPNFVVWIEEMSKNDGYRQTKRDPKELVEVLKSRFLVSFG 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4444598 4450259 - Bda011972.3 Bda15g00189 21884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00189 434 Pfam Protein phosphatase 2C 167 243 IPR001932 -
Bda15g00189 434 Pfam Glutathione S-transferase, C-terminal domain 339 403 - -
Bda15g00189 434 CDD GST_C_Lambda 309 426 - -
Bda15g00189 434 SUPERFAMILY PP2C-like 167 244 IPR036457 -
Bda15g00189 434 Gene3D Glutaredoxin 251 303 - -
Bda15g00189 434 ProSitePatterns PPM-type phosphatase domain signature. 84 92 IPR000222 GO:0043169
Bda15g00189 434 SMART PP2C_4 44 255 IPR001932 -
Bda15g00189 434 Gene3D - 304 433 - -
Bda15g00189 434 ProSiteProfiles PPM-type phosphatase domain profile. 50 365 IPR001932 -
Bda15g00189 434 SUPERFAMILY GST C-terminal domain-like 298 429 IPR036282 -
Bda15g00189 434 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 246 430 - -
Bda15g00189 434 Gene3D - 168 250 IPR036457 -
Bda15g00189 434 PANTHER GLUTATHIONE S-TRANSFERASE L1 246 430 IPR044629 GO:0004364
Bda15g00189 434 SUPERFAMILY Thioredoxin-like 251 305 IPR036249 -
Bda15g00189 434 CDD PP2Cc 51 245 IPR001932 -
Bda15g00189 434 Pfam Glutathione S-transferase, N-terminal domain 251 303 IPR004045 -
Bda15g00189 434 Gene3D - 40 116 IPR036457 -
Bda15g00189 434 Gene3D - 117 167 IPR036457 -
Bda15g00189 434 SUPERFAMILY PP2C-like 77 168 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00474 Bda-Chr6:6763367 Bda15g00189 Bda-Chr15:4444598 1.88E-57 dispersed
Bda15g00189 Bda-Chr15:4444598 Bda08g00331 Bda-Chr8:3402194 8.47E-53 dispersed
Bda05g01248 Bda-Chr5:60334650 Bda15g00189 Bda-Chr15:4444598 2.33E-50 transposed
Bda14g00327 Bda-Chr14:2222047 Bda15g00189 Bda-Chr15:4444598 2.22E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00189 K00799 - qsu:112015804 303.523