Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00207 ATGGCAGACTACGACCTTACCCAACGTATCGCTCCCAATCTCGATCGTCACCTCGTGTTCCCGCTGCTTGAATTTTTTCAGGAACGGCAGCTTCACCCAGATGAGCGGATACTCAAGTCTAAGATCGAGCTTCTCAATAAGACCAACGTGGTCGACTACGCCATGGATATTCACAAGTCGCTTTACCATTCCGAAGAAGTGCCTCAGGATATGGTGGAGAGGAGAGCCGAGGTGGTTTCCCGGATTAAGGCTTTGGAAAGAATCGGTCCGAACCAGATTGAGGCGCTGTATCAATATGCTAAGTTTCAGTTTGAGTGTGGAAACTACTCTGGAGCTGCAGATTATTTGTATCAGTACAGGGCCTTGTGCACAAATAGCGAAAGGAGTTTGAGTGCATTATGGGGAAAGCTTGCTGCAGAAATACTGATGCAGAATTGGGACATTGCTCTGGAAGAACTTAATCGATTGAAAGAAATTATTGACTCAAAGAGTTTTCAATCACCAATGAGTAAGGTCCAAAGCCGAATATGGCTAATGCATTGGAGTCTGTTCATCTTTTTTAATCATGATAATGGAAGAACACAGATTATTGACCTAATTAATCAAGACAAGTATTTAAATGCCATTCAAACTAACATGAAAGAGTGCGAGGAAGTGATATTGAATGATCCATTTCTTGGTAAACGAGTTGAAGATGGAAACTATTCAACTGTTCCATTGAGAGATGAGTTTCTAGAGAATGCACGTTTATTCATCTTTGAGACGTATTGCCAAATACATCGGCGGATAGAAATGAGTGTTCTTGCTGAGAAATTGAACTTGAATTATGATGATGCTGAGAGATGGATTGCAAATCTTATCCGAGGTTCAAAGCTCGATGCCAAGATTGATTCAAAGTCGGGAATTGTCGACATGGAACCCAACCATTCAAATGTGTATGAGCAGCCGATAGACCACACCAAGGCATTATCAGGGAGAACTTACAAGTTAGTCAGTCAGCTTCTAGAACATTCCCAGACTCAGGCAGCTCGATAA 1035 42.22 MADYDLTQRIAPNLDRHLVFPLLEFFQERQLHPDERILKSKIELLNKTNVVDYAMDIHKSLYHSEEVPQDMVERRAEVVSRIKALERIGPNQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALEELNRLKEIIDSKSFQSPMSKVQSRIWLMHWSLFIFFNHDNGRTQIIDLINQDKYLNAIQTNMKECEEVILNDPFLGKRVEDGNYSTVPLRDEFLENARLFIFETYCQIHRRIEMSVLAEKLNLNYDDAERWIANLIRGSKLDAKIDSKSGIVDMEPNHSNVYEQPIDHTKALSGRTYKLVSQLLEHSQTQAAR 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4753226 4760760 + Bda011996.1 Bda15g00207 21902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00207 344 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 86 - -
Bda15g00207 344 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 87 212 - -
Bda15g00207 344 Pfam eIF3 subunit 6 N terminal domain 5 86 IPR019010 -
Bda15g00207 344 Gene3D - 195 340 - -
Bda15g00207 344 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 86 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bda15g00207 344 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 87 212 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bda15g00207 344 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 210 342 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bda15g00207 344 SMART eIF3_N_2 5 103 IPR019010 -
Bda15g00207 344 SUPERFAMILY Winged helix DNA-binding domain 239 309 IPR036390 -
Bda15g00207 344 ProSiteProfiles PCI domain profile. 151 310 IPR000717 -
Bda15g00207 344 PIRSF Transl_init_eIF3e 1 87 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bda15g00207 344 PIRSF Transl_init_eIF3e 82 214 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bda15g00207 344 PIRSF Transl_init_eIF3e 210 344 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bda15g00207 344 SUPERFAMILY TPR-like 88 156 IPR011990 GO:0005515
Bda15g00207 344 Hamap Eukaryotic translation initiation factor 3 subunit E [EIF3E]. 2 336 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bda15g00207 344 Pfam PCI domain 202 306 IPR000717 -
Bda15g00207 344 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 239 323 - -
Bda15g00207 344 SMART PINT_4 239 323 IPR000717 -
Bda15g00207 344 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 210 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01551 Bda-Chr3:54606949 Bda15g00207 Bda-Chr15:4753226 0 dispersed
Bda06g01170 Bda-Chr6:41136157 Bda15g00207 Bda-Chr15:4753226 2.90E-22 dispersed
Bda15g00207 Bda-Chr15:4753226 Bda05g01037 Bda-Chr5:58813599 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00207 K03250 - dcr:108228073 543.888