Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00213 TCTTTCCAGCACAAAACCTTTTGGATGCCCAGAGATGCTGGGTGTTTAACTGAAGGAGAGATGGGCTATGATAGTTCTTCCAGAATGGATTCAAAACGTGGGCATCAGTGGTTCATGGATGGCAGTGCTCCAGAACTATTTAGCAGCAAGAAGCAAGCAACAGAAGCAGTAAACAATGGACCTGTACCAGGAGTTTCACATATGAATGTTTCTCTATGGGATAACTCTTCTGGTTTTCAGTCTGTTCCTGGGCAGTTAAGTGATCGCCTCTATGGACCTGGACCTATGAGGACTGTCAATCTGGTTGACACAAACATTTCTACCCTTGGACATGGAGATATACACATAGGAAGAAAGGATTTTGAGAATCAATACGGTAGTGATTCCTCTGTAGGCTTATCCATGTCCCATACTACGGAAGATACGCCCTACAACAAGGGAAATGGAAATTTTATTTCAATGGGGCCAACTTATAGTAAAGCAAATGAAAATTTCATTTCAATGGCTTCCTCCTATAACAAGGGCACAGGAGAGGCTTTATCAATGGGTACAACCTATGACAAAGTTGATTCTGAATTTGTAACTTTGGGTACTAACTATGAAAGAGGGAACTCTGGGGTTCTATCAATGGGCCACAACTATAATAAGGGCGAGGGGACTACCATATCTTTTGGAGGGTTCGATGAGGAACCTGAGACAAATAATCCCTCTGGTGGGATCATCAGTAGCTATGATTTGTTGATGGGCACTCAGCATTCGGCTCATATCTCAGAAGTATCCATCCAGAAAGATTTTATGGATTCAAGTGCTGATGGTAGTGTCAACAATTTTGTGAAGGCAAACATGGACAACTCAGTAAAAGGTAAAGAGCCAAAGACAACTAAGAAGGTTTCCCCAAATAGTTTCCCTTCAAATGTCAAAAGTTTGTTATCAACTGGTATGCTAGACGGGGTTCCTGTGAAATATGTTTCTTGGTCGAGGGAAAAAAATCTGAAAGGCGTCATAAAAGGAACTGGCTATTTGTGCGACTGTGACAAGTGTATGCAATGTAAGGCTCTCAATGCTTATGAATTTGAGCGTCATGCTGGTTGCAAGACCAAACATCCTAATAATCACATTTATTTTGAGAATGGGAAGACCATATATGCAGTTGTTCAAGAGTTGAAGAACACTCCTCAGGAGATGCTATTTGATGCTATTCAGAACGTGACAGGCTCACCTATTAATCAGAAAAACTTCCGTATATGGAAAGCTTCATATCAAGCTGCCACCCGAGAACTTCAGCGTATTTATGGGACAGAGGAAGTAATCATGCCATCTTGA 1323 41.5 SFQHKTFWMPRDAGCLTEGEMGYDSSSRMDSKRGHQWFMDGSAPELFSSKKQATEAVNNGPVPGVSHMNVSLWDNSSGFQSVPGQLSDRLYGPGPMRTVNLVDTNISTLGHGDIHIGRKDFENQYGSDSSVGLSMSHTTEDTPYNKGNGNFISMGPTYSKANENFISMASSYNKGTGEALSMGTTYDKVDSEFVTLGTNYERGNSGVLSMGHNYNKGEGTTISFGGFDEEPETNNPSGGIISSYDLLMGTQHSAHISEVSIQKDFMDSSADGSVNNFVKANMDNSVKGKEPKTTKKVSPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGVIKGTGYLCDCDKCMQCKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSPINQKNFRIWKASYQAATRELQRIYGTEEVIMPS 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4884941 4887100 + Bda012006.1 Bda15g00213 21908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00213 440 Pfam Tify domain binding domain 333 388 IPR032308 -
Bda15g00213 440 PANTHER N-LYSINE METHYLTRANSFERASE 3 142 - -
Bda15g00213 440 PANTHER N-LYSINE METHYLTRANSFERASE 143 440 - -
Bda15g00213 440 PANTHER AUTOIMMUNE REGULATOR 3 142 - -
Bda15g00213 440 PANTHER AUTOIMMUNE REGULATOR 143 440 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00213 Bda-Chr15:4884941 Bda02g00726 Bda-Chr2:48115506 1.58E-16 dispersed
Bda14g00310 Bda-Chr14:2096479 Bda15g00213 Bda-Chr15:4884941 1.18E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00213 - - csv:101206313 459.914