Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00214 ATGTCAATGGAGGTGTTGGTGAGAGTATTTAATGAAGGACGGCCATTTCTGGCTGTCATTTTTTTGCAGTTTGGATACGCAGGAATGTCCATTATTAAAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTCCATGCATGACATGCACGCCAGTGATCGATCAGAATTTGTACTACACTGGCATGAAGTATACAACTGCAACCTTCACAGCTGCCATGTCCAATGTTCTTCCTGCTTTTTCATTCTTACTGGCTTGGCTCTTAAGGCTGGAGAAGGTTGATATAAGGAGCCTTCACGGCCAGGCCAAGATAGTGGGAACTATGGTGACAGTAGGAGGAGCAATGCTCATGACTTTGATCAGAGGACCAAATTTGAATCTCCCATGGACAAACCAAGATCAGAATTACCATAACGACTCTTCCAGCTCTGCCAACAAGCAAGATCCTCTTAAAGGAGCTCTAATGATCTCAGCTGGCTGTGTTAGCTGGTCTGGATTTATCATTCTCCAAGCGATTACACTAAAATCTTATCCGGTTGAGCTTTCCTTAACAGCCTGGATCTGCTTTATGGGTATGGTGGAAGGAACTTTCCTGGCTATGGCGTTGGAATGGAAGGATTCTGCAGCTTGGTCGATCCATTTAGATGCTAAATTTTTTACTGCTCTTTACGGCGGGATAGTGTGTTCTGGGATTGCTTATTATGTTCAAGGAGTCATAATGAAGAAAAGAGGGCCTGTTTTTGTGACTGCATTCAGCCCTCTCTCCATGGTTATTGTTGCAGTATTGGGGTCCTTCATTTTGTCTGAGATCATGTACTTAGGAAGGGTGATTGGAGCCACTGTGATTGTGTTTGGATTGTACCTGGTATTGTGGGGAAAGAGTAAGGATCAGATTCTATCAAATACAGCAACTGGAAAGCCAGCACCAACAGATCAAGAAATGGGCGGTATAAATGAGACACAGTAA 975 43.9 MSMEVLVRVFNEGRPFLAVIFLQFGYAGMSIIKGLSLSLSLSLSLSIPCMTCTPVIDQNLYYTGMKYTTATFTAAMSNVLPAFSFLLAWLLRLEKVDIRSLHGQAKIVGTMVTVGGAMLMTLIRGPNLNLPWTNQDQNYHNDSSSSANKQDPLKGALMISAGCVSWSGFIILQAITLKSYPVELSLTAWICFMGMVEGTFLAMALEWKDSAAWSIHLDAKFFTALYGGIVCSGIAYYVQGVIMKKRGPVFVTAFSPLSMVIVAVLGSFILSEIMYLGRVIGATVIVFGLYLVLWGKSKDQILSNTATGKPAPTDQEMGGINETQ 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4887989 4890351 - Bda012007.1 Bda15g00214 21909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00214 324 MobiDBLite consensus disorder prediction 305 324 - -
Bda15g00214 324 PANTHER WAT1-RELATED PROTEIN 52 305 - -
Bda15g00214 324 PANTHER WAT1-RELATED PROTEIN 52 305 IPR030184 GO:0016021|GO:0022857
Bda15g00214 324 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 112 - -
Bda15g00214 324 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 298 - -
Bda15g00214 324 Pfam EamA-like transporter family 154 293 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00113 Bda-Chr15:3501403 Bda15g00214 Bda-Chr15:4887989 3.65E-83 dispersed
Bda15g00214 Bda-Chr15:4887989 Bda03g00845 Bda-Chr3:7300685 5.30E-63 dispersed
Bda14g00309 Bda-Chr14:2083309 Bda15g00214 Bda-Chr15:4887989 9.54E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00214 - - twl:119989988 404.445