Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00221 GATGCTAAGCGTCTGATCGGTAGGAGATTTAGCGATACAACCGTTCAAAACGATATAAAACTCTGGCCATTCGAGGTTATTGCTGGCCCTGGTGACAAGCCCATGATTGTTGTCAATTACAAGGGTGAAGAGAAGCAATTTGCTGCAGAAGAAATCTCGTCTATGGTGCTTATTAAGATGAAGGAGATAGCCGAGGCTTACCTTGGATCTACCGTGAAGAATGCCGTCGTGACTGTCCCTGCTTATTTCAATGACTCCCAACGTCAAGCAACGAAAGACGCTGGAGTCATCGCTGGTCTCAATGTCATGCGTATTATCAATGAACCAACTGCAGCCGCCATTGCATATGGTCTTGACAAGAAGGCTACAAGCTCTGGCGAGAAAAATGTGCTTATTTTTGACTTGGGAGGTGGCACTTTTGATGTCTCGTTGCTCACAATTGAAGAGGGGATCTTTGAGGTGAAAGCTACTGCCGGAGACACTCATCTTGGAGGGGAGGACTTTGATAATAGATTGGTGAATCACTTTGTCCAGGAGTTTAAGAGGAAGCATAAGAAGGATATTAGTGGAAATCCTCGCGCTCTTAGGAGACTGAGAACTGCCTGTGAGAGGGCGAAGAGAACTCTTTCGTCCACTGCCCAGACCACGATTGAGATTGATTCTTTGTACGAGGGTATTGACTTTTATTCAACAATTACTCGTGCGAGATTTGAGGAACTCAACATGGATCTGTTCAGGAAATGTATGGAGCCTGTCGAGAAGTGTTTAAGGGATGCCAAGATGGACAAAAGTTCTGTCCATGATGTTGTTCTTGTCGGTGGCTCGACAAGAATTCCTAAAGTTCAGCAGTTGTTGCAGGATTTATTCAACGGGAAGGAGCTCTGCAAGAGCATCAACCCAGATGAGGCTGTGGCTTACGGCGCTGCTGTCCAGGCTGCCATTTTGAGTGGCGAAGGTAATGAGAAAGTGCAGGACTTGTTACTCTTGGATGTCACTCCCCTGTCTCTTGGATTAGAGACGGCTGGAGGCGTGATGACTGTCTTAATTCCGAGAAATACGACAATCCCGACGAAGAAAGAGCAAGTCTTCTCGACCTATTCAGACAACCAACCAGGCGTTTTGATTCAGGTTTACGAGGGTGAGAGAGCAAGGACGAGGGACAATAACTTGTTGGGCAAATTTGAGCTTTCTGGCATTCCTCCTGCCCCCAGGGGTGTTCCTCAAATTACTGTCTGCTTTGACATTGACGCCAACGGAATCCTAAATGTTTCTGCGGAGGACAAAACTACTGGCCAGAAGAACAAGATTACGATCACCAACGACAAGGGAAGGCTATCAAAGAACGAGATTGAGAAGATGGTCCAGGAGGCGGAAAAGTACAAATCCGAGGACGAAGAGCACAAGAAGAAAGTTGATTCCAAGAATGCATTGGAGAATTATGCTTACAACATGAGGAACACCATCAAAGACGAGAAGATCGGTTCTAAGCTAGATCCCACAGAGAAGAAGAAGATTGAGGATGCAATCGAACAGGCAATTCAGTGGTTGGAGAGCAACCAGCTAGCGGAAGCTGATGAGTTTGAAGATAAAATGAAAGAGCTGGAAAGCATTTGCAATCCCATCATCGCCAAGATGTACCAAGGCGCAGCTCCGGGCACGGCCAATGGCATGGATTATGATGAAGCTCCGACAACGGGTGCTGGCCCCAAAATTGAAGAAGTTGATTAA 1728 46.47 DAKRLIGRRFSDTTVQNDIKLWPFEVIAGPGDKPMIVVNYKGEEKQFAAEEISSMVLIKMKEIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDLFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKNEIEKMVQEAEKYKSEDEEHKKKVDSKNALENYAYNMRNTIKDEKIGSKLDPTEKKKIEDAIEQAIQWLESNQLAEADEFEDKMKELESICNPIIAKMYQGAAPGTANGMDYDEAPTTGAGPKIEEVD 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4939002 4940729 + Bda012014.1 Bda15g00221 21916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00221 575 MobiDBLite consensus disorder prediction 550 575 - -
Bda15g00221 575 Gene3D Actin; Chain A, domain 4 164 247 - -
Bda15g00221 575 SUPERFAMILY Actin-like ATPase domain 126 317 IPR043129 -
Bda15g00221 575 PRINTS 70kDa heat shock protein signature 298 318 - -
Bda15g00221 575 PRINTS 70kDa heat shock protein signature 406 422 - -
Bda15g00221 575 PRINTS 70kDa heat shock protein signature 138 148 - -
Bda15g00221 575 PRINTS 70kDa heat shock protein signature 266 282 - -
Bda15g00221 575 PRINTS 70kDa heat shock protein signature 325 344 - -
Bda15g00221 575 PRINTS 70kDa heat shock protein signature 75 95 - -
Bda15g00221 575 Coils Coil 450 470 - -
Bda15g00221 575 Coils Coil 517 537 - -
Bda15g00221 575 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 472 552 IPR029048 -
Bda15g00221 575 Gene3D - 1 55 - -
Bda15g00221 575 ProSitePatterns Heat shock hsp70 proteins family signature 3. 269 283 IPR018181 -
Bda15g00221 575 PANTHER HEAT SHOCK PROTEIN 70KDA 1 557 IPR013126 GO:0005524|GO:0140662
Bda15g00221 575 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 320 474 IPR029047 -
Bda15g00221 575 Gene3D - 475 548 IPR029048 -
Bda15g00221 575 Pfam Hsp70 protein 1 547 IPR013126 GO:0005524|GO:0140662
Bda15g00221 575 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 557 - -
Bda15g00221 575 ProSitePatterns Heat shock hsp70 proteins family signature 2. 132 145 IPR018181 -
Bda15g00221 575 Gene3D - 56 313 - -
Bda15g00221 575 SUPERFAMILY Actin-like ATPase domain 1 120 IPR043129 -
Bda15g00221 575 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 321 478 IPR029047 -
Bda15g00221 575 Gene3D - 121 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00658 Bda-Chr8:6863907 Bda15g00221 Bda-Chr15:4939002 0 dispersed
Bda09g00902 Bda-Chr9:25240003 Bda15g00221 Bda-Chr15:4939002 0 dispersed
Bda11g00113 Bda-Chr11:1530228 Bda15g00221 Bda-Chr15:4939002 0 dispersed
Bda14g00125 Bda-Chr14:864123 Bda15g00221 Bda-Chr15:4939002 0 dispersed
Bda01g00233 Bda-Chr1:26390836 Bda15g00221 Bda-Chr15:4939002 0 wgd
Bda14g00118 Bda-Chr14:808053 Bda15g00221 Bda-Chr15:4939002 0 wgd
Bda15g00221 Bda-Chr15:4939002 Bda02g00813 Bda-Chr2:48756502 0 wgd
Bda15g00221 Bda-Chr15:4939002 Bda03g00776 Bda-Chr3:6509888 0 wgd
Bda15g00221 Bda-Chr15:4939002 Bda05g00971 Bda-Chr5:58206516 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00221 K03283 - tcc:18586110 1053.89