Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00260 ATGGCTTCCCACGCCCCTAATTTGGAGTGCCGAATGTACGAGGCAAGATACCCTGAGGTTGATATGGCCGTCATGATTCAGGTTAAAAATATTGCGGACATGGGAGCCTATGTCTCCCTCCTCGAGTACAATAACATCGAGGGTATGATTCTTTTCTCCGAGCTGTCTCGTCGCAGGATTCGTAGTGTTAGCAGCCTGATCAAGGTGGGTCGCATCGAGCCCGTGATGGTCCTCAGGGTCGACAGGGAGAAGGGATACATTGATTTGAGCAAAAGAAGAGTCTCTGAGGAAGATATCCAGGCTTGTGAAGAGAGGTACAACAAGAGCAAGCTCGTTCACTCTATTATGCGCCATGTTGCCGAGACGCTGGATATAGATTTAGAGGACCTATATATCCACATTGGCTGGCCTTTATACCGGAAATATGGTCATGCTTTTGAGGCATTCAAGATAATAGTTACTGATCCTGATTCAGTTCTGAATTCACTTACCCGTGAAGTTAAGGAAACTGCCCCTGGTGGACAGGAGGTGACCAAGGTAGTCCCTGCTATTTCCGAAGAGGTCAAAGAAGCACTGGTTAAGAATATAAGGAGAAGAATGACTCCCCAACCTTTAAAAGTTCGGGCTGATATTGAAATCAAATGTTTTCAGTTTGATGGCGTTCTTCACATTAAGGAAGCAATGAGGAAGGCTGAAGCTGCAGGCAATGATGATTGTCCTGTTAAAATTAAGCTGGTTGCTCCTCCTCTATACGTTCTTACTACTCAGACTATTGACAAGGAACAAGGGATAACAGTCCTTAACAACGCAATCGTCGCTTGTACTGAAGCCATAGAAAAGCACAAGGGGAAGCTTGTGGTGAAGGAGGCACCCAGAGCAGTGAGTGAACGGGACGATAAGTTACTTGCCGAACACATGGCCAAGCTTCGACAGGACAACGAGGAGATAAGCGGAGACGAAGATAGCGAGGAAGAAGATGACACAGGGATGGGAGAAGTAGATGTTGAAAATGCAGGTCCTGGGATAACAGAGTGA 1035 46.47 MASHAPNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDREKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLDIDLEDLYIHIGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKETAPGGQEVTKVVPAISEEVKEALVKNIRRRMTPQPLKVRADIEIKCFQFDGVLHIKEAMRKAEAAGNDDCPVKIKLVAPPLYVLTTQTIDKEQGITVLNNAIVACTEAIEKHKGKLVVKEAPRAVSERDDKLLAEHMAKLRQDNEEISGDEDSEEEDDTGMGEVDVENAGPGITE 344
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
15 5216055 5218690 - Bda012055.1 Bda15g00260 21955
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00260 344 SUPERFAMILY eIF2alpha middle domain-like 94 199 IPR024054 -
Bda15g00260 344 Gene3D Translation initiation factor 2; subunit 1; domain 2 95 198 IPR024054 -
Bda15g00260 344 SUPERFAMILY eIF-2-alpha, C-terminal domain 203 319 IPR024055 -
Bda15g00260 344 Pfam S1 RNA binding domain 18 92 IPR003029 GO:0003676
Bda15g00260 344 Gene3D - 6 94 IPR012340 -
Bda15g00260 344 MobiDBLite consensus disorder prediction 304 344 - -
Bda15g00260 344 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 5 343 IPR011488 GO:0003723|GO:0003743
Bda15g00260 344 SMART S1_6 19 92 IPR022967 -
Bda15g00260 344 Coils Coil 306 326 - -
Bda15g00260 344 SUPERFAMILY Nucleic acid-binding proteins 11 92 IPR012340 -
Bda15g00260 344 CDD S1_IF2_alpha 18 93 IPR044126 GO:0003723
Bda15g00260 344 Gene3D EIF_2_alpha 205 327 IPR024055 -
Bda15g00260 344 ProSiteProfiles S1 domain profile. 21 92 IPR003029 GO:0003676
Bda15g00260 344 Pfam Eukaryotic translation initiation factor 2 alpha subunit 130 260 IPR011488 GO:0003723|GO:0003743
Bda15g00260 344 PANTHER BNAC04G04870D PROTEIN 5 343 - -
Bda15g00260 344 MobiDBLite consensus disorder prediction 316 332 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00238 Bda-Chr14:1606620 Bda15g00260 Bda-Chr15:5216055 7.77E-175 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00260 K03237 - csv:101209681 615.92