Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00277 ATGGATCCCGACGCCTTCACGGCCAGTTTATTCAAGTGGGACCCTCGAGCTGCTGTTGGACCACCCAATCGCTTACTAGACCAGGTGGCTACTCCATCCGCCGGCGCCGCTGTTGTTACCACGACGTTCTCAGTCCGACCGAGGGGTCTGGGTGGGCTGGAAGACTTGTTTCAGGCTTACGGTATCAGATACTACACCGCAACAAAGATAGCAGAGCTTGGATTCACCGTGAGTACTCTGTTGAACATGAAAGACGTAGAGCTGGACGATATGATGAACAGTCTCTCGCAGATATTCCGGTGGGACCTTTTGGTCGGAGAGAGGTACGGCATTAAAGCGGCTGTTAGAGCCGAGAGAAGACGACTGGAAGATGAAATGGATTCCCGGCGCCGCCACTTACTCTCCGCTGATACTGTCAATAACGTTTTTGATGCTCTCTCTCAGGAAGGTCGATTATCGGAGGAGCCAGTGCGTCAAGAAAAGGAGGTGATCCGAAGCGGCGGAGGAGGACCAAGGGAGGTGATTGCAGCTTCAGAGAAGAAGAACCGACGACGTCGGAAGGGGCAAAGAAACCTGCTAGTTGATTTGGATAACGACGGAAACGATGTAGGAGAAGAAGACGACGACGACGACATTAATGATGGAAATGAAAGACAACGAGAACACCCTTTCATCGTGACAGAACCAGGAGAAGTTGCGAGAGGCAAGAAGAATGGCCTCGATTACCTCTTCCACCTTTACGAACAGTGCCGTGAATTTCTGATCCAGGTGCAGAATATAGCCAAGGACCGCGGCGAGAAATGCCCCACCAAGGTGACGAACCAGGTGTTTAGATACGCGAAGAAGGCCGGAGCGAGCTACATCAACAAGCCCAAAATGCGGCACTACGTCCACTGCTACGCGCTGCATTGCCTGGACGAGGAGGCATCGAATGCGCTGAGGAGGGCGTTCAAAGACAGGGGGGAGAACGTCGGAGCTTGGCGACAAGCCTGCTACAAACCTCTGGTGGGCGTCGCCGCCCGGCGAGGGTGGGACATAGACGCGATATTCAACTCCCATCCTCGTTTGACTATTTGGTACGTCCCCACCAAACTCCGGCAGCTTTGTCACTCTGACCGCAATAGCGTTGCAGCTTCTAGCTGTGTCTCCAATGGCCGCGATCTCATTCCCTTC 1173 53.71 MDPDAFTASLFKWDPRAAVGPPNRLLDQVATPSAGAAVVTTTFSVRPRGLGGLEDLFQAYGIRYYTATKIAELGFTVSTLLNMKDVELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRLEDEMDSRRRHLLSADTVNNVFDALSQEGRLSEEPVRQEKEVIRSGGGGPREVIAASEKKNRRRRKGQRNLLVDLDNDGNDVGEEDDDDDINDGNERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKDRGENVGAWRQACYKPLVGVAARRGWDIDAIFNSHPRLTIWYVPTKLRQLCHSDRNSVAASSCVSNGRDLIPF 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5541614 5542961 + Bda033278 Bda15g00277 21972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00277 391 MobiDBLite consensus disorder prediction 199 214 - -
Bda15g00277 391 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 214 377 IPR035209 GO:0003677
Bda15g00277 391 Pfam Floricaula / Leafy protein SAM domain 50 126 IPR035079 -
Bda15g00277 391 PANTHER PROTEIN LEAFY 1 387 IPR002910 GO:0003677|GO:0006355
Bda15g00277 391 MobiDBLite consensus disorder prediction 151 167 - -
Bda15g00277 391 MobiDBLite consensus disorder prediction 150 221 - -
Bda15g00277 391 Gene3D Protein LEAFY 214 383 IPR038276 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00199 Bda-Chr14:1396639 Bda15g00277 Bda-Chr15:5541614 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17151 PF17538 C_LFY_FLO 2.20E-108 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00277 - - vvi:100252653 591.267