Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00291 ATGCGTTTGATGAGGCTGCCCCTGTTGAAGATGCGGAATCTGGGTGAGGTGCTCATCTTGTTACTATTGGCTCCGGTGTTCGCGCGCGGTCTGAATCCCCCTCTGAACGATGATGTCTTGGGACTCATAGTGTTCAAAGCCGATATTCAAGATGCGAAGGGGAATCTTGCCTCTTGGAATGAAGACGATGATTGTCCGTGTAACTGGGTCGGTGTGCAATGTAACCCGAGATCCAAGCGGGTCACTGAGCTCAACCTTGCCGGATTCTCCCTCTCTGGTCGTCTAGGCCGAGGCCTCGTTCAGCTACAGTTTCTGCGAAAGCTATCGCTCTCAAACAACAATCTCACCGGAAATGTAGGCCCTAACATTGCACGGATCGATAATCTCCGAGTGATCGATTTCGGGAACAACGGATTTTCAGGAAGTTTACCTAACGATTTCTTCAAGCAATGTGGGTCTTTGAGAGTGGTTTCTTTGGCCGGGAACAAATTTTCAGGGAAAATCCCAGACAGTTTAACCTCATGCGCTGGTCTCGCTGCACTTAACCTATCATCTAATCAGTTCTCTGGTTCATTACCTTCTGGAATTTGGTCCCTAAGTGGACTTCGCTCGCTTGATTTGTCGGATAATCTATTAGAGGGTAACATTCAGAAGGAGGTCGACGGCTTGAATAATTTGCGAGCTATTAACTTGAGTAAGAATCGATTTTCTGGTCAGATTCCCGATGGAATGGGAAATTGTTTGCTCTTGCGCTCCATAGACCTCAGTGAGAATTCGTTTTCCGGCAACCTTCCAGACACCCTCCGGCAACTTTCTCTGTGTCGTAATTTAAAGTTGCAGAAGAACTCATTTGTTGGCAAAGTTCCTGACTGGATACAGGAAATGAAAAGTCTAGAGACGGTGGATCTTTCGGCAAACATATTTTCTGGTCAGGTTCCCGATTCAGTCGGAAACCTCCCCTCGCTCAAGGTATTGAATTTTTCAAGTAATGGCTTTACTGGTAGTTTGCCGAAGTCTCTGATTAATTGCCAGAGCTTAATGGTCTTAGATTTCAGTCATAATTCTATCTCCGGTGATTTCTCTACCTGGATTTCCAAAATGGGCTCACAGAATCTCTTGCTTTCAGAGAGCAAGCAGAGCAGAAGCCCGACTAGTTCAATATCTACTGTATCTGAGAAATCACTTCCAAATCTTCAAATCTTGGACCTATCTCACAATGCTTTCTCTGGTGTAATGGCGCCTGACATTGGGATTTTTGACAACCTACAGCTCTTAAACTTGGCCGGAAATTCTCTCGCCGGTGATATTCCAAAATCCATCGGAGGTCTGACGGCCCTGGATACCCTTGATTTGAGTGGGAATCGGCTAAATGGAAGTATTCCGGAGGAAATTTGTGAAGCCCCGGCCTTGAAGGTGCTGAAACTGGAGAAAAACTCTCTTGCAGGATCAATTCCTTGTTCAATTGGAAAGTGTTCTTCTCTAATGACTTTAATCTTATCGGAGAACAAATTATCCGGCCAGATACCTGCATCGATGGCTAACCTTACTGATCTTCATAATGTGGACTTGTCTTTTAACCTCCTCAATGGAACTCTCCCTAAGCAACTCTCTAATCTTCCCAACCTACTCTTGTTCAACATTTCGCACAACGACATCCATGGTGAACTGCCTGCCGGAGGATTTTTCAACACCATATCCCCTTCCTCTGTCTCCGGCAATCCATCTCTATGTGGCTCTGTTGTTAAGAAATCTTGTCCTGCAGTTCTTCCCAAACCCATTGTTCTTAACCCCAACTCGTCCTCTGACTCCACTGCAACTACTCTCCCTTCGGGTCTTGCTGACAAGAGAATCATCCTCAGCATATCAACTCTCATCGCCATTGGAGCAGCTGCTTTGATTGTGATTGGCGTAATAGCAATCACTGTGCTTAATATCCGAGTTCGATCATCCATTTCTCGTTCTGCAGCAGCCCCCGCTTTTTCTGCCAGAGATGACTTTAGTCACTCCCCCGCCACTGACACCAATTCCGGCAAGCTTGTCATGTTTTCTGGCGACCCGGACTTCAGTACCGGGGCTCATGCTTTGCTCAATAAAGATTGTGAGCTTGGGAGGGGCGGATTTGGGACGGTCTACAAGACCCTTCTTCGGGATGGGCATCCAGTTGCGATCAAGAAGCTCACTGTCTCCAGTCTCGTCAAGTCCCAAGACGACTTCGAAAGGGAAGTTAAGAAGTTGGGGAAAGTCCAGCACCGGAATATCATCACCCTTCATGGTTATTACTGGACTCCGTCACTGCAGCTCCTCATCTCTGAATTTGTAGCAGGAGGAAGTTTGTATTCGCACCTCCATGAAGTAACGGATGGAAACTTCCTCTCGTGGAATGAGAGGTTCAACATTATACTCGGGATGGCGAAAAGCATTGCGTACTTACACCAAGTGAACATAATCCACTACAATATCAAGGCAAGCAACATCTTGATCGACAGCTCTGGCGAACCAAAGATCGGAGATTTCGGCCTGGCAAGGCTACTGCCGATGCTAGACCGGTACGTTTTGAGCAGCAAGATTCAGAGTGCACTTGGCTATATGGCACCTGAATTTGCCTGTAAAACGGTGAAAATAACAGAAAAATGTGATGTTTATGGGTTTGGGGTTTTAGTCTTGGAAGTGGTCACCGGAAAAAGACCGGTCGAGTACATGGAAGATGATGTGGTTGTTCTTTGTGACATGGTGAGAGGAGCATTGGAGGAAGGCAATGTGGAAGAATGCGTTGACCAGAGGCTCTTGGGGACCTTTCCGGCCGAGGAAGCAATTCCGGTCATGAAATTAGGCTTGATCTGCACTTCTCAAGTGCCGTCAAACCGGCCAGACATGGGTGAGGTTGTAAATATATTGGAGCTGATACGAAGCCCGTCAGAAGGCAACGACGAATCAGGATGA 2940 46.8 MRLMRLPLLKMRNLGEVLILLLLAPVFARGLNPPLNDDVLGLIVFKADIQDAKGNLASWNEDDDCPCNWVGVQCNPRSKRVTELNLAGFSLSGRLGRGLVQLQFLRKLSLSNNNLTGNVGPNIARIDNLRVIDFGNNGFSGSLPNDFFKQCGSLRVVSLAGNKFSGKIPDSLTSCAGLAALNLSSNQFSGSLPSGIWSLSGLRSLDLSDNLLEGNIQKEVDGLNNLRAINLSKNRFSGQIPDGMGNCLLLRSIDLSENSFSGNLPDTLRQLSLCRNLKLQKNSFVGKVPDWIQEMKSLETVDLSANIFSGQVPDSVGNLPSLKVLNFSSNGFTGSLPKSLINCQSLMVLDFSHNSISGDFSTWISKMGSQNLLLSESKQSRSPTSSISTVSEKSLPNLQILDLSHNAFSGVMAPDIGIFDNLQLLNLAGNSLAGDIPKSIGGLTALDTLDLSGNRLNGSIPEEICEAPALKVLKLEKNSLAGSIPCSIGKCSSLMTLILSENKLSGQIPASMANLTDLHNVDLSFNLLNGTLPKQLSNLPNLLLFNISHNDIHGELPAGGFFNTISPSSVSGNPSLCGSVVKKSCPAVLPKPIVLNPNSSSDSTATTLPSGLADKRIILSISTLIAIGAAALIVIGVIAITVLNIRVRSSISRSAAAPAFSARDDFSHSPATDTNSGKLVMFSGDPDFSTGAHALLNKDCELGRGGFGTVYKTLLRDGHPVAIKKLTVSSLVKSQDDFEREVKKLGKVQHRNIITLHGYYWTPSLQLLISEFVAGGSLYSHLHEVTDGNFLSWNERFNIILGMAKSIAYLHQVNIIHYNIKASNILIDSSGEPKIGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGNVEECVDQRLLGTFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRSPSEGNDESG 979
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5668759 5672321 + Bda012093.1 Bda15g00291 21986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00291 979 Gene3D Ribonuclease Inhibitor 193 291 IPR032675 -
Bda15g00291 979 Pfam Protein kinase domain 699 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00291 979 SUPERFAMILY Protein kinase-like (PK-like) 700 963 IPR011009 -
Bda15g00291 979 Gene3D Ribonuclease Inhibitor 298 588 IPR032675 -
Bda15g00291 979 Pfam Leucine rich repeat 421 480 IPR001611 GO:0005515
Bda15g00291 979 Pfam Leucine rich repeat 128 188 IPR001611 GO:0005515
Bda15g00291 979 SMART LRR_typ_2 443 467 IPR003591 -
Bda15g00291 979 SMART LRR_typ_2 319 343 IPR003591 -
Bda15g00291 979 SMART LRR_typ_2 395 421 IPR003591 -
Bda15g00291 979 SMART LRR_typ_2 223 247 IPR003591 -
Bda15g00291 979 SMART LRR_typ_2 199 222 IPR003591 -
Bda15g00291 979 SMART LRR_typ_2 102 126 IPR003591 -
Bda15g00291 979 SMART LRR_typ_2 539 563 IPR003591 -
Bda15g00291 979 ProSiteProfiles Protein kinase domain profile. 696 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00291 979 ProSitePatterns Protein kinases ATP-binding region signature. 702 725 IPR017441 GO:0005524
Bda15g00291 979 SUPERFAMILY L domain-like 50 368 - -
Bda15g00291 979 SUPERFAMILY RNI-like 276 575 - -
Bda15g00291 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 976 - -
Bda15g00291 979 PRINTS Leucine-rich repeat signature 398 411 - -
Bda15g00291 979 PRINTS Leucine-rich repeat signature 443 456 - -
Bda15g00291 979 Gene3D Ribonuclease Inhibitor 36 192 IPR032675 -
Bda15g00291 979 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Bda15g00291 979 Gene3D Transferase(Phosphotransferase) domain 1 773 978 - -
Bda15g00291 979 Gene3D Phosphorylase Kinase; domain 1 690 772 - -
Bda15g00291 979 CDD STKc_IRAK 702 968 - -
Bda15g00291 979 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 14 976 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01081 Bda-Chr3:10840197 Bda15g00291 Bda-Chr15:5668759 0 dispersed
Bda06g00060 Bda-Chr6:618366 Bda15g00291 Bda-Chr15:5668759 7.70E-166 dispersed
Bda14g00722 Bda-Chr14:5466039 Bda15g00291 Bda-Chr15:5668759 1.06E-06 dispersed
Bda15g00291 Bda-Chr15:5668759 Bda05g00872 Bda-Chr5:57171543 5.53E-134 dispersed
Bda09g01195 Bda-Chr9:42906226 Bda15g00291 Bda-Chr15:5668759 3.32E-14 transposed
Bda14g00224 Bda-Chr14:1519843 Bda15g00291 Bda-Chr15:5668759 1.04E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70093 PF00069 Pkinase 4.80E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00291 - - mcha:111006338 1376.3