Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00305 | ATGATGGTCTCTTATAAAAAAGAGCCGAAAGTGAATTTGGTGTCTTTCGATTCTTTGAGGAAGAGGAAACCTAGGGGAAGACGAGATGGATCTAATGTCGCCGATACTTTAGCAAAGTGGCAGGCTTATAATAAGAGTCTAGATACTTGTGACATTAAGGGTGAACCAATGGGGAGAACACCAGCAAAAGGATCAAAGAAAGGATGTATGAAAGGGAAGGGAGGGCCTGAAAATTCACGGTGTAATTACAGAGGAGTGAGGCAGAGGACTTGGGGCAAGTGGGTTGCTGAAATACGGGAACCCAACCGATGTAGCAGACTCTGGCTCGGAACTTTTCCAACTGCTATGGAAGCTGCACTGGCCTATGATGAAGCTGCGAGGGCCATGTATGGTCAGAATGCACGCCTTAATTTTCCCAATGTGAGAAAACAAGCTCTAGTTAATGGAGATTCGATAGTGAATTTTTTAGGTTCGGCAGAGGTGGATTCTTCATCAGCAGCCACTTCGACGGGTTCTTATTCGGTTTCATCTATGACCAGTTCTATGATTGTAAAGAATGAGAATGAAGATCATGAAACTGACGTTCTCTCATCAAGTGGAGTGTTAAATCAAGAAAATAAGGAATTTGTGGACAATGAAGATCACAATCTCATTATTAAAACCGTTACTTCTCCAGAACCTAGGAGTGTTACTTCTTATCCATCATCTGGCGACATCGCCGAAGGATTGAATGTACTGTGGGATGACTTGGAGAAGTTTCCGATGGATGAAATGTTCGATGCAGAAGAATTGAATGAGCTCATAGACAGTAATCCACTTTGTGAGCCTAGCTTGATGGAAGATTTAAACGGCACGGATAGTAATTTGAATTTCCTTCGAGGTGATGATCTTGATCTTCACAAACCAGCAAATTTATTCTATCAACTGCAAAATCCAGATGCAAAGTTGCTTGGAAGTTTGAATCACATGGAGCAGGCAGGTTTGGAGGCGGATTACTGTGACTTCTTGAAGCCAGAAAACGAAGAAGGCAGCATGAACAATGTTGGTGGATGGCCTGGGTACATTGATTTGGGATTACTTGATTTGGGTTTTGAAGAATTACAGTGA | 1107 | 42.37 | MMVSYKKEPKVNLVSFDSLRKRKPRGRRDGSNVADTLAKWQAYNKSLDTCDIKGEPMGRTPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRCSRLWLGTFPTAMEAALAYDEAARAMYGQNARLNFPNVRKQALVNGDSIVNFLGSAEVDSSSAATSTGSYSVSSMTSSMIVKNENEDHETDVLSSSGVLNQENKEFVDNEDHNLIIKTVTSPEPRSVTSYPSSGDIAEGLNVLWDDLEKFPMDEMFDAEELNELIDSNPLCEPSLMEDLNGTDSNLNFLRGDDLDLHKPANLFYQLQNPDAKLLGSLNHMEQAGLEADYCDFLKPENEEGSMNNVGGWPGYIDLGLLDLGFEELQ | 368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 5872633 | 5873739 | + | Bda012112.1 | Bda15g00305 | 22000 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00305 | 368 | CDD | AP2 | 81 | 141 | IPR001471 | GO:0003700|GO:0006355 | |
Bda15g00305 | 368 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C | 17 | 339 | - | - | |
Bda15g00305 | 368 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 17 | 339 | - | - | |
Bda15g00305 | 368 | Gene3D | AP2/ERF domain | 82 | 141 | IPR036955 | GO:0003700|GO:0006355 | |
Bda15g00305 | 368 | PRINTS | Ethylene responsive element binding protein signature | 83 | 94 | IPR001471 | GO:0003700|GO:0006355 | |
Bda15g00305 | 368 | PRINTS | Ethylene responsive element binding protein signature | 105 | 121 | IPR001471 | GO:0003700|GO:0006355 | |
Bda15g00305 | 368 | SUPERFAMILY | DNA-binding domain | 82 | 139 | IPR016177 | GO:0003677 | |
Bda15g00305 | 368 | MobiDBLite | consensus disorder prediction | 54 | 77 | - | - | |
Bda15g00305 | 368 | Pfam | AP2 domain | 81 | 131 | IPR001471 | GO:0003700|GO:0006355 | |
Bda15g00305 | 368 | SMART | rav1_2 | 82 | 145 | IPR001471 | GO:0003700|GO:0006355 | |
Bda15g00305 | 368 | ProSiteProfiles | AP2/ERF domain profile. | 82 | 139 | IPR001471 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda14g00230 | Bda15g00305 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00273 | Bda-Chr3:2403070 | Bda15g00305 | Bda-Chr15:5872633 | 1.33E-28 | dispersed | |
Bda05g01056 | Bda-Chr5:59056020 | Bda15g00305 | Bda-Chr15:5872633 | 1.14E-27 | dispersed | |
Bda08g01252 | Bda-Chr8:51156170 | Bda15g00305 | Bda-Chr15:5872633 | 5.95E-30 | dispersed | |
Bda15g00305 | Bda-Chr15:5872633 | Bda03g00498 | Bda-Chr3:4235216 | 1.80E-24 | dispersed | |
Bda14g00230 | Bda-Chr14:1560956 | Bda15g00305 | Bda-Chr15:5872633 | 4.70E-51 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17156 | PF00847 | AP2 | 2.30E-14 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00305 | - | K09286 | zju:107413944 | 275.789 |