Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00305 ATGATGGTCTCTTATAAAAAAGAGCCGAAAGTGAATTTGGTGTCTTTCGATTCTTTGAGGAAGAGGAAACCTAGGGGAAGACGAGATGGATCTAATGTCGCCGATACTTTAGCAAAGTGGCAGGCTTATAATAAGAGTCTAGATACTTGTGACATTAAGGGTGAACCAATGGGGAGAACACCAGCAAAAGGATCAAAGAAAGGATGTATGAAAGGGAAGGGAGGGCCTGAAAATTCACGGTGTAATTACAGAGGAGTGAGGCAGAGGACTTGGGGCAAGTGGGTTGCTGAAATACGGGAACCCAACCGATGTAGCAGACTCTGGCTCGGAACTTTTCCAACTGCTATGGAAGCTGCACTGGCCTATGATGAAGCTGCGAGGGCCATGTATGGTCAGAATGCACGCCTTAATTTTCCCAATGTGAGAAAACAAGCTCTAGTTAATGGAGATTCGATAGTGAATTTTTTAGGTTCGGCAGAGGTGGATTCTTCATCAGCAGCCACTTCGACGGGTTCTTATTCGGTTTCATCTATGACCAGTTCTATGATTGTAAAGAATGAGAATGAAGATCATGAAACTGACGTTCTCTCATCAAGTGGAGTGTTAAATCAAGAAAATAAGGAATTTGTGGACAATGAAGATCACAATCTCATTATTAAAACCGTTACTTCTCCAGAACCTAGGAGTGTTACTTCTTATCCATCATCTGGCGACATCGCCGAAGGATTGAATGTACTGTGGGATGACTTGGAGAAGTTTCCGATGGATGAAATGTTCGATGCAGAAGAATTGAATGAGCTCATAGACAGTAATCCACTTTGTGAGCCTAGCTTGATGGAAGATTTAAACGGCACGGATAGTAATTTGAATTTCCTTCGAGGTGATGATCTTGATCTTCACAAACCAGCAAATTTATTCTATCAACTGCAAAATCCAGATGCAAAGTTGCTTGGAAGTTTGAATCACATGGAGCAGGCAGGTTTGGAGGCGGATTACTGTGACTTCTTGAAGCCAGAAAACGAAGAAGGCAGCATGAACAATGTTGGTGGATGGCCTGGGTACATTGATTTGGGATTACTTGATTTGGGTTTTGAAGAATTACAGTGA 1107 42.37 MMVSYKKEPKVNLVSFDSLRKRKPRGRRDGSNVADTLAKWQAYNKSLDTCDIKGEPMGRTPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRCSRLWLGTFPTAMEAALAYDEAARAMYGQNARLNFPNVRKQALVNGDSIVNFLGSAEVDSSSAATSTGSYSVSSMTSSMIVKNENEDHETDVLSSSGVLNQENKEFVDNEDHNLIIKTVTSPEPRSVTSYPSSGDIAEGLNVLWDDLEKFPMDEMFDAEELNELIDSNPLCEPSLMEDLNGTDSNLNFLRGDDLDLHKPANLFYQLQNPDAKLLGSLNHMEQAGLEADYCDFLKPENEEGSMNNVGGWPGYIDLGLLDLGFEELQ 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5872633 5873739 + Bda012112.1 Bda15g00305 22000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00305 368 CDD AP2 81 141 IPR001471 GO:0003700|GO:0006355
Bda15g00305 368 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 17 339 - -
Bda15g00305 368 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 17 339 - -
Bda15g00305 368 Gene3D AP2/ERF domain 82 141 IPR036955 GO:0003700|GO:0006355
Bda15g00305 368 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Bda15g00305 368 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Bda15g00305 368 SUPERFAMILY DNA-binding domain 82 139 IPR016177 GO:0003677
Bda15g00305 368 MobiDBLite consensus disorder prediction 54 77 - -
Bda15g00305 368 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Bda15g00305 368 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Bda15g00305 368 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00230 Bda15g00305 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00273 Bda-Chr3:2403070 Bda15g00305 Bda-Chr15:5872633 1.33E-28 dispersed
Bda05g01056 Bda-Chr5:59056020 Bda15g00305 Bda-Chr15:5872633 1.14E-27 dispersed
Bda08g01252 Bda-Chr8:51156170 Bda15g00305 Bda-Chr15:5872633 5.95E-30 dispersed
Bda15g00305 Bda-Chr15:5872633 Bda03g00498 Bda-Chr3:4235216 1.80E-24 dispersed
Bda14g00230 Bda-Chr14:1560956 Bda15g00305 Bda-Chr15:5872633 4.70E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17156 PF00847 AP2 2.30E-14 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00305 - K09286 zju:107413944 275.789