Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00339 ATGGAACGCACTATGAAGCTCCTCCTCTTCCTGGCAGCTCTGCTGACGATCTCCTCCACCGGAGACTCTGCTAAGATCTGTTCCGACTGCGGCTCCACCGCCGTCCCTTACCCTTTGAGCACCGATCCCAACTGCGGCGACCAGTCCTACAAAATACGGTGCGACGCTGGCTCCCTCAAGTTCGATTCCCTCAACAACACTTACTCCATCACCTCCATCGATTCCTCCGATCAACGTCTGGTTATCCAGCCCTCTCCACTCCTCTCCAACTCCTGCGTCGCATCTGATATCATCCACGAAGGAGTACAACTCAACAGCAGCCTCCCTTTTAACGTCACCAGTAGTAACACCATCTTGTACTTTAACTGTACGGAATCTCTGCTCATGTCACCGTTAAACTGCAATTCGACGAGCTTGTGCCACACCTATATCAACAGCTCGAGGGGGGTGTCGGCATGTGGGGGAACGTCGTTGTGCTGTACTTTCAGAGCCGGTGGGTCGTCGACTTCGTATATGATTCGAGTTCGCGAATCGGGTTGTAGTGCGTATACGAGTTTCGTCGATTTGGACCCGAATTTGCCGGTAAACCAGTGGCCGCAGCCCGGATTAGCGATTCAGTGGGTGCTGCCGGAAGAGCCTGAGTGCGGAGCTCAATCTGACTGCGATGGCAACGCCACCTGCGCGGCTGATCCAGCTCTGGCCGGGACCAGAAGATGTTTTTGCAATTCTGGGCTCGTATGGAACCCGGCTGCGGGTGTCTGCTCTGAAAATAGTACGTGTCAAGATCCAGACGGTTGCAGTGGGTCCACCAACCGTACGCCATTAATAGCAGGATTGACCGCCGGAATTGGATCAGCGATTGTTGCAGGAGTAATTGCCGTGGTGTTATATAGAAGACACAGGCGAATGAAAGAAGCTCAAGAACGCTTAGCCAAAGAGCGGGAAGAAATTCTCAACGCCAATGGAGGAAGATCGGCAAAAATTTTCACCGGGAAAGAGATAAAGAAAGCCACCCACAATTTCTCCAGAGACTGCCTTCTGGGTTCCGGTGGCTACGGCGACGTCTTCAAAGGCGTTCTTAGCGACGGAACTGTCGTGGCGATCAAATGCGCTAAGCTCGGAAACGCGAAAGGCACCGATCAAGTCCTCAATGAGGTCCGAATTCTCTGTCAAGTAAACCACCGCAATCTGGTTCGTCTTCTCGGTTGCTGTACCGAGCTCGAGCAGCCGATCATGGTGTACGAGTACATTCCGAACGGAACTCTTCTCGACCATTTAAAAGGTCTGCTCCCAGGAGGCCGCGGCGTCCTAAACTGGATTTCGCGTCTGAACATTGCCCGAGACACCGCCGAAGGTCTCGCATATCTTCACTTCTCGGCGGTGCCGCCGATTTATCACCGAGACGTGAAGTCCAGCAACATTCTGCTAGACGAAAAAATGAACGCTAAAGTATCGGATTTCGGGTTATCTCGGTTGGCACAAACCGATTTAAGCCATATATCGACTTGTGCTCAGGGAACTCTCGGATATTTGGATCCAGAATATTACAGAAACTATCAACTCACCGATAAGAGCGACGTCTACAGTTTTGGTGTCGTGTTGTTGGAACTTTTGACAGCCCAGAAAGCAATAGATTTCAACAGGGAAGCGGATGATGTGAACTTGGCGGTGTACGTGCAGAGGCTGGTGGACGAGGAGAGATTAACGGACGCCATTGATCCGATGCTCAAAGAAGGAGCGAGCGACGTGGAGTTGGACACGATGAAGGCTTTGGGTTTTCTCGCAGTTGGGTGCTTAGAAGAGAAACGACAGAATCGACCTTCCATGAAAGAAGTTACAGAGGAGATTGAATATATTATTAGTATTGCAGCTTCCAAGGTCGTTCCTTTTCAGAGTTAA 1899 51.24 MERTMKLLLFLAALLTISSTGDSAKICSDCGSTAVPYPLSTDPNCGDQSYKIRCDAGSLKFDSLNNTYSITSIDSSDQRLVIQPSPLLSNSCVASDIIHEGVQLNSSLPFNVTSSNTILYFNCTESLLMSPLNCNSTSLCHTYINSSRGVSACGGTSLCCTFRAGGSSTSYMIRVRESGCSAYTSFVDLDPNLPVNQWPQPGLAIQWVLPEEPECGAQSDCDGNATCAADPALAGTRRCFCNSGLVWNPAAGVCSENSTCQDPDGCSGSTNRTPLIAGLTAGIGSAIVAGVIAVVLYRRHRRMKEAQERLAKEREEILNANGGRSAKIFTGKEIKKATHNFSRDCLLGSGGYGDVFKGVLSDGTVVAIKCAKLGNAKGTDQVLNEVRILCQVNHRNLVRLLGCCTELEQPIMVYEYIPNGTLLDHLKGLLPGGRGVLNWISRLNIARDTAEGLAYLHFSAVPPIYHRDVKSSNILLDEKMNAKVSDFGLSRLAQTDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTAQKAIDFNREADDVNLAVYVQRLVDEERLTDAIDPMLKEGASDVELDTMKALGFLAVGCLEEKRQNRPSMKEVTEEIEYIISIAASKVVPFQS 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6253955 6256208 - Bda012147.1 Bda15g00339 22034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00339 632 Coils Coil 303 323 - -
Bda15g00339 632 ProSiteProfiles Protein kinase domain profile. 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00339 632 CDD STKc_IRAK 347 617 - -
Bda15g00339 632 Gene3D Phosphorylase Kinase; domain 1 311 416 - -
Bda15g00339 632 SUPERFAMILY Protein kinase-like (PK-like) 324 616 IPR011009 -
Bda15g00339 632 PANTHER OS05G0318100 PROTEIN 19 625 - -
Bda15g00339 632 Pfam Protein kinase domain 345 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00339 632 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 625 IPR045274 GO:0007166
Bda15g00339 632 Gene3D Transferase(Phosphotransferase) domain 1 417 627 - -
Bda15g00339 632 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Bda15g00339 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Bda15g00339 632 SMART serkin_6 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00242 Bda-Chr12:2535204 Bda15g00339 Bda-Chr15:6253955 1.29E-74 dispersed
Bda13g01455 Bda-Chr13:37372959 Bda15g00339 Bda-Chr15:6253955 2.69E-85 dispersed
Bda15g00513 Bda-Chr15:8203506 Bda15g00339 Bda-Chr15:6253955 3.79E-76 dispersed
Bda01g00373 Bda-Chr1:29593819 Bda15g00339 Bda-Chr15:6253955 0 transposed
Bda04g00307 Bda-Chr4:46531151 Bda15g00339 Bda-Chr15:6253955 1.70E-93 transposed
Bda14g00376 Bda-Chr14:2728868 Bda15g00339 Bda-Chr15:6253955 5.30E-45 transposed
Bda08g00079 Bda-Chr8:734113 Bda15g00339 Bda-Chr15:6253955 6.41E-06 transposed
Bda15g00339 Bda-Chr15:6253955 Bda02g00841 Bda-Chr2:48955693 1.82E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70095 PF00069 Pkinase 9.60E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00339 - - jre:108983353 941.799