Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00380 | ATGGGTAAGGAGAAGGTTCACATCAACATTGTGGTCATCGGCCATGTCGACTCCGGGAAGTCCACCACCACCGGCCACTTAATCTACAAGCTTGGTGGCATTGACAAGCGTGTGATTGAGCGATTTGAGAAAGAAGCTGCTGAGATGAACAAGAGATCATTCAAGTACGCATGGGTGTTGGACAAGCTTAAGGCCGAGCGTGAGAGGGGTATCACTATTGATATTGCCTTGTGGAAGTTTGAAACCACTAAATACTACTGCACTGTCATTGATGCCCCTGGACATCGAGACTTCATCAAAAACATGATTACTGGAACTTCGCAAGCTGATTGTGCTGTTCTTATCATTGATTCTACGACTGGAGGTTTCGAAGCTGGTATTTCCAAGGATGGTCAAACTCGTGAGCATGCTCTTCTCGCCTTCACTCTTGGAGTGAAGCAAATGATTTGCTGCTGTAACAAGATGGATGCTACAACCCCGAAATATTCTAAGGCGAGGTACGATGAAATTGTGAAGGAAGTCTCTTCCTACTTGAAGAAAGTTGGTTATAACCCCGATAAAATTCCTTTTGTCCCCATTTCTGGATTTGAAGGCGACAACATGATTGAGAGGTCTACGAACCTTGACTGGTACAAGGGTCCGACTCTTCTCGATGCTCTTGACTTGATCCTGGAACCCAAGAGACCCACGGACAAGCCTCTCAGGCTCCCGCTTCAAGATGTTTACAAGATTGGTGGTATTGGTACCGTTCCGGTGGGACGGGTTGAGACTGGTGTTCTCAAGCCTGGTATGGTTGTTACTTTTGGCCCAACTGGTCTGACTACTGAGGTCAAGTCTGTTGAGATGCACCATGAGGCTCTTCAAGAAGCTCTCCCGGGCGACAATGTCGGTTTCAACGTTAAGAATGTTGCAGTGAAGGATCTCAAGCGTGGCTTTGTTGCTTCTAATTCTAAGGACGATCCTGCTAGGGAAGCGGCCAACTTCACCTCCCAAGTTATCATTATGAACCACCCTGGCCAGATTGGAAATGGTTATGCCCCTGTTCTTGATTGTCACACCTCGCACATTGCTGTCAAATTCGGAGAGATACTGACCAAGATTGACAGACGATCTGGAAAGGAGCTCGAGAAGGAGCCAAAGTTCTTGAAGAATGGCGATGCTGGGTTTGTCAAGATGCTTCCCACCAAACCCATGGTTGTGGAGACCTTCTCTGAGTATCCCCCACTCGGCCGTTTTGCTGTCCGAGACATGCGGCAAACGGTGGCCGTCGGTGTCATCAAGAGCGTCGAGAAGAAGGATCCATCTGGTGCAAAGGTCACAAAGTCTGCTGCCAAGAAAACTGGCAAGTGA | 1350 | 48.07 | MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDLILEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKELEKEPKFLKNGDAGFVKMLPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKTGK | 449 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 6732927 | 6734363 | + | Bda012195.1 | Bda15g00380 | 22075 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00380 | 449 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 249 | IPR027417 | - | |
Bda15g00380 | 449 | Pfam | Elongation factor Tu C-terminal domain | 322 | 429 | IPR004160 | - | |
Bda15g00380 | 449 | Gene3D | - | 1 | 226 | IPR027417 | - | |
Bda15g00380 | 449 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 326 | 429 | IPR009001 | - | |
Bda15g00380 | 449 | TIGRFAM | EF-1_alpha: translation elongation factor EF-1, subunit alpha | 1 | 433 | IPR004539 | GO:0003746|GO:0005525|GO:0006414 | |
Bda15g00380 | 449 | Pfam | Elongation factor Tu GTP binding domain | 6 | 224 | IPR000795 | GO:0003924|GO:0005525 | |
Bda15g00380 | 449 | PANTHER | TRANSLATION FACTOR | 1 | 447 | - | - | |
Bda15g00380 | 449 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 61 | 76 | IPR031157 | - | |
Bda15g00380 | 449 | CDD | EF1_alpha_II | 230 | 320 | - | - | |
Bda15g00380 | 449 | Gene3D | Translation factors | 229 | 316 | - | - | |
Bda15g00380 | 449 | PANTHER | ELONGATION FACTOR 1-ALPHA-LIKE | 1 | 447 | - | - | |
Bda15g00380 | 449 | CDD | EF1_alpha_III | 323 | 426 | - | - | |
Bda15g00380 | 449 | Hamap | Elongation factor Tu [tuf]. | 2 | 432 | IPR004539 | GO:0003746|GO:0005525|GO:0006414 | |
Bda15g00380 | 449 | CDD | EF1_alpha | 9 | 227 | - | - | |
Bda15g00380 | 449 | SUPERFAMILY | Translation proteins | 226 | 321 | IPR009000 | - | |
Bda15g00380 | 449 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 5 | 230 | IPR000795 | GO:0003924|GO:0005525 | |
Bda15g00380 | 449 | Gene3D | Translation factors | 323 | 430 | - | - | |
Bda15g00380 | 449 | PRINTS | GTP-binding elongation factor signature | 148 | 157 | IPR000795 | GO:0003924|GO:0005525 | |
Bda15g00380 | 449 | PRINTS | GTP-binding elongation factor signature | 88 | 98 | IPR000795 | GO:0003924|GO:0005525 | |
Bda15g00380 | 449 | PRINTS | GTP-binding elongation factor signature | 104 | 115 | IPR000795 | GO:0003924|GO:0005525 | |
Bda15g00380 | 449 | PRINTS | GTP-binding elongation factor signature | 9 | 22 | IPR000795 | GO:0003924|GO:0005525 | |
Bda15g00380 | 449 | PRINTS | GTP-binding elongation factor signature | 68 | 76 | IPR000795 | GO:0003924|GO:0005525 | |
Bda15g00380 | 449 | Pfam | Elongation factor Tu domain 2 | 248 | 313 | IPR004161 | GO:0005525 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00704 | Bda-Chr1:34325974 | Bda15g00380 | Bda-Chr15:6732927 | 7.05E-85 | dispersed | |
Bda02g00775 | Bda-Chr2:48461320 | Bda15g00380 | Bda-Chr15:6732927 | 0 | dispersed | |
Bda11g00347 | Bda-Chr11:3873899 | Bda15g00380 | Bda-Chr15:6732927 | 0 | dispersed | |
Bda11g01780 | Bda-Chr11:52655314 | Bda15g00380 | Bda-Chr15:6732927 | 2.08E-86 | dispersed | |
Bda11g01644 | Bda-Chr11:50442640 | Bda15g00380 | Bda-Chr15:6732927 | 8.62E-46 | transposed | |
Bda14g00079 | Bda-Chr14:613788 | Bda15g00380 | Bda-Chr15:6732927 | 1.70E-56 | wgd | |
Bda15g00380 | Bda-Chr15:6732927 | Bda02g00774 | Bda-Chr2:48458204 | 0 | wgd | |
Bda15g00380 | Bda-Chr15:6732927 | Bda09g01471 | Bda-Chr9:46517877 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00380 | K03231 | - | dct:110098189 | 892.878 |