Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00387 | ATGGCCAAGGCTACGGAAGTTTCTGCGCAAGGATCGTTCTCGGCGAAGGACTACCACGACCCACCACCGGCGCCGCTCGTTGACGCGGAGGAGCTGTTGCAGTGGTCTTTCTACAGGGCGTTGATAGCGGAGTTTATAGCTACTTTGCTTTTTCTCTACGTCACTGTCTTGACTGTGATTGGGTATAACAACCAAACCACGTCCGACCCATGCGGCGGCGTAGGGGTTTTAGGCATCGCATGGGCCTTCGGCGGCATGATCTTCGTTCTCGTCTACTGCACTGCTGGAATTTCAGGGGGTCACATAAACCCGGCGGTGACCTTGGGGTTGCTCTTGGCTCGAAAGGTGTCGCTGGTCCGAGCCGTGATGTACATGGTGGTTCAGTGTTTAGGAGCCATATGCGGAGTGGGGCTCGTTAAGGCGTTCCAAAAGTCTCATTACAGTAATCATGGAGGTGGAGCTAACCATCTCGCCGATGGCTACAGCACAGGCGTCGGTCTGGGCGCAGAGATCATAGGCACCTTCGTTTTGGTCTACACAGTCTTCTCTGCCACTGATCCGAAGAGAAATGCCAGAGACTCCCACGTTCCGGTTCTGGCTCCGCTTCCGATCGGATTTGCTGTGTTCATGGTTCACTTGGCCACAATCCCGATCACCGGCACCGGAATCAACCCAGCTAGAAGTCTCGGAGCTGCAGTCGTCTACAATCAGAAAAACACTTGGGATGAGCAATGGATTTTTTGGGTCGGACCCTTCGTCGGAGCAGCCATTGCAGCGTTCTATCATCAGTTCATACTGAGGGCGGCAGCAGCTAAAGCTCTTGGATCTTTCAGGAGCAATTCCCATGTCTGA | 852 | 53.99 | MAKATEVSAQGSFSAKDYHDPPPAPLVDAEELLQWSFYRALIAEFIATLLFLYVTVLTVIGYNNQTTSDPCGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLLLARKVSLVRAVMYMVVQCLGAICGVGLVKAFQKSHYSNHGGGANHLADGYSTGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNQKNTWDEQWIFWVGPFVGAAIAAFYHQFILRAAAAKALGSFRSNSHV | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 6795935 | 6797068 | - | Bda012202.1 | Bda15g00387 | 22082 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00387 | 283 | Pfam | Major intrinsic protein | 32 | 262 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda15g00387 | 283 | SUPERFAMILY | Aquaporin-like | 31 | 267 | IPR023271 | - | |
Bda15g00387 | 283 | ProSitePatterns | MIP family signature. | 101 | 109 | IPR022357 | - | |
Bda15g00387 | 283 | CDD | MIP | 39 | 265 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda15g00387 | 283 | PRINTS | Major intrinsic protein family signature | 169 | 187 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda15g00387 | 283 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda15g00387 | 283 | PRINTS | Major intrinsic protein family signature | 83 | 107 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda15g00387 | 283 | PRINTS | Major intrinsic protein family signature | 205 | 227 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda15g00387 | 283 | PRINTS | Major intrinsic protein family signature | 245 | 265 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda15g00387 | 283 | PRINTS | Major intrinsic protein family signature | 120 | 139 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda15g00387 | 283 | PANTHER | AQUAPORIN PIP2-1 | 7 | 280 | - | - | |
Bda15g00387 | 283 | Gene3D | Glycerol uptake facilitator protein. | 24 | 283 | IPR023271 | - | |
Bda15g00387 | 283 | TIGRFAM | MIP: MIP family channel proteins | 43 | 262 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda15g00387 | 283 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 7 | 280 | IPR034294 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01478 | Bda-Chr3:52936262 | Bda15g00387 | Bda-Chr15:6795935 | 3.00E-10 | dispersed | |
Bda15g00387 | Bda-Chr15:6795935 | Bda15g01030 | Bda-Chr15:19294203 | 1.00E-150 | dispersed | |
Bda15g00387 | Bda-Chr15:6795935 | Bda02g00760 | Bda-Chr2:48365973 | 3.83E-178 | wgd | |
Bda15g00387 | Bda-Chr15:6795935 | Bda03g00743 | Bda-Chr3:6309940 | 6.73E-165 | wgd | |
Bda15g00387 | Bda-Chr15:6795935 | Bda09g01459 | Bda-Chr9:46436180 | 6.13E-175 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00387 | K09872 | - | gmx:100815583 | 496.893 |