Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00387 ATGGCCAAGGCTACGGAAGTTTCTGCGCAAGGATCGTTCTCGGCGAAGGACTACCACGACCCACCACCGGCGCCGCTCGTTGACGCGGAGGAGCTGTTGCAGTGGTCTTTCTACAGGGCGTTGATAGCGGAGTTTATAGCTACTTTGCTTTTTCTCTACGTCACTGTCTTGACTGTGATTGGGTATAACAACCAAACCACGTCCGACCCATGCGGCGGCGTAGGGGTTTTAGGCATCGCATGGGCCTTCGGCGGCATGATCTTCGTTCTCGTCTACTGCACTGCTGGAATTTCAGGGGGTCACATAAACCCGGCGGTGACCTTGGGGTTGCTCTTGGCTCGAAAGGTGTCGCTGGTCCGAGCCGTGATGTACATGGTGGTTCAGTGTTTAGGAGCCATATGCGGAGTGGGGCTCGTTAAGGCGTTCCAAAAGTCTCATTACAGTAATCATGGAGGTGGAGCTAACCATCTCGCCGATGGCTACAGCACAGGCGTCGGTCTGGGCGCAGAGATCATAGGCACCTTCGTTTTGGTCTACACAGTCTTCTCTGCCACTGATCCGAAGAGAAATGCCAGAGACTCCCACGTTCCGGTTCTGGCTCCGCTTCCGATCGGATTTGCTGTGTTCATGGTTCACTTGGCCACAATCCCGATCACCGGCACCGGAATCAACCCAGCTAGAAGTCTCGGAGCTGCAGTCGTCTACAATCAGAAAAACACTTGGGATGAGCAATGGATTTTTTGGGTCGGACCCTTCGTCGGAGCAGCCATTGCAGCGTTCTATCATCAGTTCATACTGAGGGCGGCAGCAGCTAAAGCTCTTGGATCTTTCAGGAGCAATTCCCATGTCTGA 852 53.99 MAKATEVSAQGSFSAKDYHDPPPAPLVDAEELLQWSFYRALIAEFIATLLFLYVTVLTVIGYNNQTTSDPCGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLLLARKVSLVRAVMYMVVQCLGAICGVGLVKAFQKSHYSNHGGGANHLADGYSTGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNQKNTWDEQWIFWVGPFVGAAIAAFYHQFILRAAAAKALGSFRSNSHV 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6795935 6797068 - Bda012202.1 Bda15g00387 22082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00387 283 Pfam Major intrinsic protein 32 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g00387 283 SUPERFAMILY Aquaporin-like 31 267 IPR023271 -
Bda15g00387 283 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Bda15g00387 283 CDD MIP 39 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g00387 283 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g00387 283 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g00387 283 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g00387 283 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g00387 283 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g00387 283 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g00387 283 PANTHER AQUAPORIN PIP2-1 7 280 - -
Bda15g00387 283 Gene3D Glycerol uptake facilitator protein. 24 283 IPR023271 -
Bda15g00387 283 TIGRFAM MIP: MIP family channel proteins 43 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g00387 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 280 IPR034294 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01478 Bda-Chr3:52936262 Bda15g00387 Bda-Chr15:6795935 3.00E-10 dispersed
Bda15g00387 Bda-Chr15:6795935 Bda15g01030 Bda-Chr15:19294203 1.00E-150 dispersed
Bda15g00387 Bda-Chr15:6795935 Bda02g00760 Bda-Chr2:48365973 3.83E-178 wgd
Bda15g00387 Bda-Chr15:6795935 Bda03g00743 Bda-Chr3:6309940 6.73E-165 wgd
Bda15g00387 Bda-Chr15:6795935 Bda09g01459 Bda-Chr9:46436180 6.13E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00387 K09872 - gmx:100815583 496.893