Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00402 ATGGGAGGTGGGTCAGAATCGTCTTCAAATTATTCTCAATCTGAGATAGTTTTCTTCGGGATTGACAATATACATGCAATGAGAGAGAGTCTCGCTAGGCTTAGAGACTACTTAGATACTCATGGTGCCTCTTCATCTGATGGAATGTCATCATTCTTGAGACATGGTGGATGGACTTGGGGTGGAGGGAATCTGAGTAGTATGTCTGCTTCCGTATCTACTCTTGGAGACAGTGGTTGGTTAATACACGTCCAAACTGTCTTGGCTGGTTCAGCATGGATTGCTGCACGCGTTGAATTGGAATCTGCATCAGTTCTTGTTCATTGCAGTGATGGTTGGGACAGAACAACTCAACTGGTATCACTTGCTAGTTTGTTGCTTGATCCATACTATCGGACATTCACAGGGTTTCAGGCTCTGATCGAGAAGGATTGGCTGGCATTTGGCCATCCTTGTTCAGATCGCATGGGTGTACCATCTATGTTCGGAAGTGGGAACATACCTTCTGAACTATCTAGGCAGTCTTCTACGGGGAGTTTCCCCTCATCTCCTCTGCGCCAGTCATCAGGATCATTCACATCTCAAGCTCCTGTTCCTCCTCAGGCTCACTCATCAAACAATTATTCTCCAATATTTTTGCAGTGGATTGATTGTGTATCGCAACTTCTGCGGATCTATCCATTTGCATTTGAGTTTTCCTCGGCTTTTTTGGTGGATTTGTTAGATTGTTTTCTTTCATGTCGCTTTGGGAACTTCCTGTGCAATAGTGAGAAGGAGAGGCAGCAATGTGGTGTTTCTGAAGAAAAGGAAATGGCAGAAAGAAAAGGTAAAGAGATGACATCTCTCATGAAGTCATTAAATGTGGAATTGCGAAAGGAGAGACAACTTAGCAGCTCAGCGATGAACTTAGCAAAAAGAGCGAGCAAGGAAAGCGAGTCGATAAAGCGAGCAATACAATCTCTTGGTTGTAAAGTTAATATCTCCAACAATAGCGATTGTGTAGTAGATGTAGAAGATAATCCAATGGAGGCTTCTCAGAGGTTTAAATATTTATCGAAAAGAGAATCAGATGGGAAGGCGCAGGAAAATGATCTCTCTGTATCTGTAACATTCGTCGAAGATGAAGAGACTAACAGTCCCTTCGGAAGTATTTGTGAAACGCTCTGCCCATCACGGACAAGAGAAGGATGCTGCAGGTGGCCAGACGCAGGTTGTGCGCAGATGGGTAGCCAATTTGTTGGACTGAAAGCAAACTTCGATGCATTTGATCGTCTATCGCTACAAGAAAGTTATTTTAAGTCTGAT 1305 43.52 MGGGSESSSNYSQSEIVFFGIDNIHAMRESLARLRDYLDTHGASSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQTVLAGSAWIAARVELESASVLVHCSDGWDRTTQLVSLASLLLDPYYRTFTGFQALIEKDWLAFGHPCSDRMGVPSMFGSGNIPSELSRQSSTGSFPSSPLRQSSGSFTSQAPVPPQAHSSNNYSPIFLQWIDCVSQLLRIYPFAFEFSSAFLVDLLDCFLSCRFGNFLCNSEKERQQCGVSEEKEMAERKGKEMTSLMKSLNVELRKERQLSSSAMNLAKRASKESESIKRAIQSLGCKVNISNNSDCVVDVEDNPMEASQRFKYLSKRESDGKAQENDLSVSVTFVEDEETNSPFGSICETLCPSRTREGCCRWPDAGCAQMGSQFVGLKANFDAFDRLSLQESYFKSD 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6933242 6942196 + Bda033294 Bda15g00402 22097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00402 435 PANTHER MYOTUBULARIN-RELATED 1 267 IPR030564 -
Bda15g00402 435 ProSitePatterns Tyrosine specific protein phosphatases active site. 107 117 IPR016130 GO:0016311|GO:0016791
Bda15g00402 435 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 267 434 - -
Bda15g00402 435 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 1 267 - -
Bda15g00402 435 PANTHER MYOTUBULARIN-RELATED 267 434 IPR030564 -
Bda15g00402 435 ProSiteProfiles Myotubularin phosphatase domain. 1 334 IPR010569 -
Bda15g00402 435 MobiDBLite consensus disorder prediction 169 201 - -
Bda15g00402 435 Pfam Myotubularin-like phosphatase domain 1 261 IPR010569 -
Bda15g00402 435 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 1 267 IPR029021 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00402 K18081 - twl:119989182 477.633