Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00419 ATGAGCTCGTTTGGAATATTTGAGGAAATTGGATTTGACAGTAATCTGGAGGCTCTATCTGAGCCTCCCATCCAAGAACAGGATATGGGGGAGGAGGATTATAGTGATGAAGAGATGGAGATTGAGGAGCTGGAGAGAAGAATGTGGAGAGATCGAATCCTATTGAAGCGACTCAAAGAACATAGCAACGAAAAGGGAGGGCTGCAAAATTTGAAGAAGAGTCAATCGCAAGAGCAAGCTCGGAGGAAGAAGATGTCGAGAGCGCAGGATGGTATATTGAAATATATGTTGAAAATGATGGAAGTGTGTAAAGCCCAAGGATTTGTGTACGGAATAATTCCTGAGAAGGGAAAGCCAGTGAGTGGGGCTTCCGATAATCTCCGAGCTTGGTGGAAGGAAAAGGTTCGATTCGATCGTAATGGCCCAGCTGCCATTTCTAAATATCAAGCAAACCATATTGATGGCTTCGGTGCCGCGATTTGTACGCCTCACACTTTGCAAGAGCTCCAGGACACAACTCTTGGATCAATTTTATCGGCTCTGATGCAGCATTGCGATCCTCCCCAGAGGCGTTTTCCGTTGGAAAAAGGTGTTGCCCCTCCATGGTGGCCAACTGGACGGGAGCTATGGTGGGACGAGTTGGGATTTCCACAAGATCAAGGTCCGCCACCCTACAGGAAGCCTCATGATCTGAAGAAAGCATGGAAAGTCAGTGTTCTAACGGCTGTGATTAAGCACATGTTCCCTGATGTTGCTAAGATTCGGAAGCTCGTTCATCAATCCAAGTGTTTGCAGGACAAAATGACGGCAAAGGAAAGTGCCACATGGCTGGCCATTGTTAACCGGGAGAAAGATTTGGCCCGCAAGTTATATCCCGGTCAGTGTCCGCCATCAATTGCCGGTGGGCACGATTCTTTCATGACCTGTGCAACAGACGATTATGATGTCGAAGGAGTAGATGATGAATCAACCGCTGAAGTAGAGGAACACAAGCCCCTTGATTTGAAGATGAGTGGACCTAGGGATTCAATCATAATGCCTCCATTGGCTTCCAAAATCAAAGGAGACCCCATGGAGAACACTTCTGATATTATTCAAAAGAGGAAGCAACCCATTGACGAGATAAATATGATGGTGGATCGGAAGATATTTACTTGCGAGCATATAAAATGCCCGTACAGTGATTATCGCCTCGGCTTTCTTGATATTACTTCAAGAAACAATCACCAGCTCAATTGCCCGTTTCGGAGTAATTTGTCAAATTTTCAGACTAACAATGTTAGGTCGATACCAGTTTCTCTACCATTGAATCCACCCTTCCATGCTTCAGGTCTCGACCTTCCCGAGGATGGACAAAAAATAATCGCTGATTTGATGACGGTCTATGATTGTAACTTTCAACGAATCAAAAACTCTAATCCGGGGAATCTCGAGGAAATGGATGAGCTCAGAGAGAAGGAGCCAAAGTTCTGTTTTCAGGTCGAAAGCAACTTGTACAGTCATGGTGTAACCATAGGAAGAAATGTGTCTCAAGAAACAAATGTTCATACTGATTTAACGTCCCTGGAAATTCCAGACAATGGGAGCAGGACATTTGAGAGCAATCTGAATGATGATATTGTGGATTTCAGGTTTGATTCTCCATACAACTTTTCATCAGTTGATTATCCAGTTGATCCCTCGTTGCTGAAGCAAGACATCTCCTTGTGGTACCTTTGA 1719 44.68 MSSFGIFEEIGFDSNLEALSEPPIQEQDMGEEDYSDEEMEIEELERRMWRDRILLKRLKEHSNEKGGLQNLKKSQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAISKYQANHIDGFGAAICTPHTLQELQDTTLGSILSALMQHCDPPQRRFPLEKGVAPPWWPTGRELWWDELGFPQDQGPPPYRKPHDLKKAWKVSVLTAVIKHMFPDVAKIRKLVHQSKCLQDKMTAKESATWLAIVNREKDLARKLYPGQCPPSIAGGHDSFMTCATDDYDVEGVDDESTAEVEEHKPLDLKMSGPRDSIIMPPLASKIKGDPMENTSDIIQKRKQPIDEINMMVDRKIFTCEHIKCPYSDYRLGFLDITSRNNHQLNCPFRSNLSNFQTNNVRSIPVSLPLNPPFHASGLDLPEDGQKIIADLMTVYDCNFQRIKNSNPGNLEEMDELREKEPKFCFQVESNLYSHGVTIGRNVSQETNVHTDLTSLEIPDNGSRTFESNLNDDIVDFRFDSPYNFSSVDYPVDPSLLKQDISLWYL 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7057837 7059555 - Bda012234.1 Bda15g00419 22114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00419 572 MobiDBLite consensus disorder prediction 64 85 - -
Bda15g00419 572 Gene3D - 74 152 IPR023278 GO:0003700|GO:0005634
Bda15g00419 572 Pfam Ethylene insensitive 3 42 284 IPR006957 GO:0005634
Bda15g00419 572 Coils Coil 27 61 - -
Bda15g00419 572 SUPERFAMILY DNA-binding domain of EIN3-like 163 287 IPR023278 GO:0003700|GO:0005634
Bda15g00419 572 MobiDBLite consensus disorder prediction 17 37 - -
Bda15g00419 572 Gene3D - 161 294 IPR023278 GO:0003700|GO:0005634
Bda15g00419 572 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 7 571 - -
Bda15g00419 572 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 7 571 IPR006957 GO:0005634
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00361 Bda-Chr9:4619914 Bda15g00419 Bda-Chr15:7057837 0 dispersed
Bda15g00419 Bda-Chr15:7057837 Bda07g00800 Bda-Chr7:9506944 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17163 PF04873 EIN3 3.40E-126 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00419 K14514 - vvi:100250496 740.339