Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00424 ATGGGGAAGAAGAAGAAGAAGGTTTCATCCAAGATGTGGTGCTATTATTGTGATCGGGAATTCGACGACGAGAAGATACTGGTGCAGCATCAAAAGGCCAAACACTTCAAGTGCCATGTCTGTCATAAGAAGCTCTCCACCGCTGGTGGTATGGTCATCCATGTTCTCCAGGTCCACAAGGAGACCGTCCCCAAGGTTCCCAATGCAAAGCCTGGAAGGGAATCAACAGACATTGAAATATATGGGATGCAAGGAATTCCACCAGATATCTTGGCGGCACACTATGGAGATGAAGAGGAAGAACCTCCATCGAAATGGGCAAAATTGGATAGTCCATCCACTCAGCTTTTAGGAGGTGCGGTTCCCAGAGCATTAGGCATTTCATATCCTCCTCAACCAGCAATGTATGTTTGTTACAGGCCCTCTGTGCCAGCACTGCCTAATGCTTGGCCTGGTCAACCCCGACCTCAACCTTGGCTCACGCAGAATCCTAATGTTTCAATCCCATCTCCTGGAACTCTGGGCTTTCCACAGCAGCCACTGTTTCCCGTGCAGAATATGAGACCGCCACTTCCATCAACGATGACTCCTGCACTTCAGACAGCACTAATAACTCCTCCTGGATTGCCCGTATCATCAACCCCTGGTTCTGTGTCACAACCTTTGTTCCCTGTGGGTAGTAGTAGCACTCTACCTTCTCCAAATTCACTTTTCCCAACTTCCATTATTTCAACAACCATTCCTTCAATCTCGCCGGTAGAAATAAGAGGCTCCATTGGTACACATCTTGGCAGTAGCAATTCCTCTGCAAATAACGATCAAAGCTCTAGCATTCCAGGGGGGCCGTTAACTAATTCTCATTCTTATGCCTCTGGTCCCAACACTGGTGGTCCTTCTATTGGACCTCCCCCTGTAATTGCGAACAAAGCTCCTACTACCCAGACAAAGACGAATGAAGTCTATTTAGTGTGGGATGATGAGGCAATGTCTATGGAGGAAAGAAGAATGTCCTTAACAAAGTTTCAGGTGCATGATGAATCTAGCCAGATGAGTTCGATTGATGCTGCCATAGATAAGAGGATATTGGAGAGTAGGCTTGCTGGTCGGATGGCTTTTTAG 1119 47.18 MGKKKKKVSSKMWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHKETVPKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGDEEEEPPSKWAKLDSPSTQLLGGAVPRALGISYPPQPAMYVCYRPSVPALPNAWPGQPRPQPWLTQNPNVSIPSPGTLGFPQQPLFPVQNMRPPLPSTMTPALQTALITPPGLPVSSTPGSVSQPLFPVGSSSTLPSPNSLFPTSIISTTIPSISPVEIRGSIGTHLGSSNSSANNDQSSSIPGGPLTNSHSYASGPNTGGPSIGPPPVIANKAPTTQTKTNEVYLVWDDEAMSMEERRMSLTKFQVHDESSQMSSIDAAIDKRILESRLAGRMAF 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7162677 7165840 + Bda012242.1 Bda15g00424 22119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00424 372 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Bda15g00424 372 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Bda15g00424 372 SMART c2h2final6 36 59 IPR013087 -
Bda15g00424 372 SMART c2h2final6 12 35 IPR013087 -
Bda15g00424 372 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 372 - -
Bda15g00424 372 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Bda15g00424 372 PANTHER ZINC FINGER PROTEIN 207 1 372 - -
Bda15g00424 372 MobiDBLite consensus disorder prediction 261 295 - -
Bda15g00424 372 Gene3D Classic Zinc Finger 1 65 - -
Bda15g00424 372 ProSiteProfiles Zinc finger C2H2 type domain profile. 36 64 IPR013087 -
Bda15g00424 372 MobiDBLite consensus disorder prediction 261 312 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17165 None None None None Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00424 - - zju:107433467 548.895