Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00444 ATGGAAAATATTGCGGCCCAGTTGAAGAGGGGGATATCGAGGCAGTTTTCCACCGGTTCGCTTGGGCGCAACCTGAGCCGGAAGTTTACGCGCCAGTCATCGCTTGACCCGAGGCGGAACAATGCCAGATTTAGCTTCGGAAGGCAGTCTTCGCTGGACCCCATCCGGCGCAGCCCTAGTCGCGAGAACGACTTATCCGTGCCTGAGAACCTTGACTCAACCATGAACCTTCTTTTCTTGGCGTGTCGGGGCGACGTCAAGGGAGTCAATGATTTGCTCGATGAGGGGATCGATGTCAACAGCATCGACTTAGATGGCCGAACTGCGTTGCACATCGCCGCATGCGAAGGCCACGTTGAGGTTGTCAAGCTCTTGCTCAGCAGAAGGGCCAATATGGATGCTCGTGATCGCTGGGGCAGTACGGCAGCTGCTGATGCCAAACACTATGGGCAGACAGAGGTTTTCAACATTTTGAAGGCTCGCGGAGCAAAAGTTCCTAAAAACAGGAGGACGCCAATGACTGTTGCAAATCCCCGTGAAGTTCCGGAGTATGAGCTTAATCCACTTGAGCTTCAAATCCGTAGGAGTGATGGAATCTCCAAGGTTTCTTTTAACATATATCAGGGCACGTATCAAGTAGCTAAATGGAATGGAACGAAGGTTGCAGTAAAAATACTTGATAAAGAGAGCTACTCAAACCCTGATACTATAATTGCTTTCAGACATGAGTTAGCTCTATTAGAAAAGGTCCGCCATCCTAACGTAGTACAATTTGTTGGAGCAGTTACCCAGAATGTTCCAATGATGATTGTGTCAGAGTATCATTCGAAGGGAGACTTGGCTGGCTATCTTCAAAAGAAAGGGCGCTTGTCTCCATCTAAAGCTCTCAGATTTGCTCTTGATATTGCTAGGCATTGTAGTTGCTTCATATTAATAAATGAAAGTTTTATATATGCTAAAGTGAATACTTCTTCTATCTCTAATTTGAGTTTTGTACATATTTGTGATTATTTTGGTAAATTTTTGGTTACCAGGGGAATGAACTATCTTCATGAAGTTAAGCCAGACCCCATTATCCACTGTGATCTAAAGCCAAAAAATATTTTGCTCGACGTTGGAGGTCAATTGAAGGTAGCTGGATTTGGTTTGATAAGGTTGTCAAAAATTTCACCGGACAAAGCAAAACTAGCACTCCCTGAGGCTAACATTGACCTTTCAAGCATATATTTGGCGCCTGAGGTTTACAAGAATGAAATATTTGACAGAAGTGTGGACTCGTTTTCTTTTGGTCTAATTGTGTATGAGATGATTGAGGGCATACAACCTTTCCATCCTAAACCTCCGGAAGAGGCTGCAAAAATCATATGTTTGGAAGGAGAAAGACCTCAATTCAAGATCAAATTGAAAAATTATCCACAGGATTTGATAGAGTTAATTGAGGAATGCTGGGATCCAGAACCTGTCGTAAGGCCAACTTTTTCTGAGATTATTGTTCGTTTGGATAAAATAGTGTCCAACGGCTCAAAACAAGGATGGTGGAAGGACACTTTTAAGCTTCCGTGGTATGTCTTCTAA 1575 43.81 MENIAAQLKRGISRQFSTGSLGRNLSRKFTRQSSLDPRRNNARFSFGRQSSLDPIRRSPSRENDLSVPENLDSTMNLLFLACRGDVKGVNDLLDEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSRRANMDARDRWGSTAAADAKHYGQTEVFNILKARGAKVPKNRRTPMTVANPREVPEYELNPLELQIRRSDGISKVSFNIYQGTYQVAKWNGTKVAVKILDKESYSNPDTIIAFRHELALLEKVRHPNVVQFVGAVTQNVPMMIVSEYHSKGDLAGYLQKKGRLSPSKALRFALDIARHCSCFILINESFIYAKVNTSSISNLSFVHICDYFGKFLVTRGMNYLHEVKPDPIIHCDLKPKNILLDVGGQLKVAGFGLIRLSKISPDKAKLALPEANIDLSSIYLAPEVYKNEIFDRSVDSFSFGLIVYEMIEGIQPFHPKPPEEAAKIICLEGERPQFKIKLKNYPQDLIELIEECWDPEPVVRPTFSEIIVRLDKIVSNGSKQGWWKDTFKLPWYVF 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7493005 7501603 + Bda012269.2 Bda15g00444 22139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00444 524 MobiDBLite consensus disorder prediction 29 68 - -
Bda15g00444 524 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 520 - -
Bda15g00444 524 SUPERFAMILY Protein kinase-like (PK-like) 210 497 IPR011009 -
Bda15g00444 524 Pfam Protein tyrosine and serine/threonine kinase 205 499 IPR001245 GO:0004672|GO:0006468
Bda15g00444 524 Gene3D - 38 184 IPR036770 -
Bda15g00444 524 Gene3D Transferase(Phosphotransferase) domain 1 276 516 - -
Bda15g00444 524 PIRSF ILK 8 521 - -
Bda15g00444 524 ProSiteProfiles Ankyrin repeat region circular profile. 105 137 - -
Bda15g00444 524 MobiDBLite consensus disorder prediction 29 54 - -
Bda15g00444 524 ProSiteProfiles Protein kinase domain profile. 193 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00444 524 SUPERFAMILY Ankyrin repeat 64 176 IPR036770 -
Bda15g00444 524 SMART ANK_2a 105 134 IPR002110 GO:0005515
Bda15g00444 524 SMART ANK_2a 73 101 IPR002110 GO:0005515
Bda15g00444 524 SMART ANK_2a 138 167 IPR002110 GO:0005515
Bda15g00444 524 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 520 - -
Bda15g00444 524 Pfam Ankyrin repeats (3 copies) 78 165 IPR002110 GO:0005515
Bda15g00444 524 SMART serkin_6 204 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00444 524 Gene3D Phosphorylase Kinase; domain 1 206 275 - -
Bda15g00444 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
Bda15g00444 524 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00835 Bda-Chr1:39892730 Bda15g00444 Bda-Chr15:7493005 1.11E-118 dispersed
Bda10g01071 Bda-Chr10:44708023 Bda15g00444 Bda-Chr15:7493005 5.91E-76 dispersed
Bda11g01201 Bda-Chr11:12338750 Bda15g00444 Bda-Chr15:7493005 1.97E-73 dispersed
Bda14g01502 Bda-Chr14:23256427 Bda15g00444 Bda-Chr15:7493005 0 dispersed
Bda15g00444 Bda-Chr15:7493005 Bda03g00452 Bda-Chr3:3929099 8.62E-38 dispersed
Bda15g00444 Bda-Chr15:7493005 Bda07g00956 Bda-Chr7:11072390 1.69E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70098 PF07714 PK_Tyr_Ser-Thr 2.80E-44 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00444 - - mdm:103446672 790.801