Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00458 ATGGAAACTTGGCTCAAACCATTCTGGCCGAAGCTCGACCGGCGGAACGCCGTAAAGAACTTTGATCAACCCTCCTCCTCTTCCTCTTCATCTTCTTCTTCTGACTCGAGTCTTCGAACGCGCTCTCTCGACCTTTATCCAACGAGCTTCAGAGTCAGAGGCGATGATGGTGAGCTCGATATCATTTGTGGATGTTTGGGGATTTCTAGTCCCGATGATTTCGCGATCCCCGCTGCTGAATGGGAAGCCTTACGGTTAGACTACTCCTCTCGTTCCCGCTCAAAGCATCAGAACGGCGATGATTTAGAGTTTCGCCGATTGCTTCGGAAGGCAAAAAATGATTTTCAATCTCAATTTGATGTCAATTCGAACTTAATAGGTGGAGTTGAAAATGGACGGAGAGTTGGCGACGAGGATGGCAAATTCAATTCGATCTTGTCAAACGAGAACAAAGCTATGGATGACAGAGGAGAATGCATTTATGTTGTACGGCCTCCCGTTCTTTCTTCTCCTCCGGGAAAGTTGCGTTCAGTTGTTGATGACGTTAACTCCACTTGGGAAATTTGCAGATCTTTTGCTCCCAAAGATGACAAACACCCAGCTTGTAATTTAAGTCAAGCGGAAGAAAACAAGGCCAGATTTAAGGACGGTGAGAGATACGATGGCGGAGTTTGTGGAAGTGGATTGTTTGGTCCCTTGCATTCGACGAACACAACAAATGGTTACAGTGATGAGTTGAGCTTAGGGGGTCCAACAAATGTTAATGATAATGCTGCTCAGCTCGAATCTAAATTTGTTTCAGAAGAGGTGCATTATTTTACTCCCAATGGGAAATTCAAACGCAAAAATTCTTCATCATGGCAAAAATGTGATCTTTTGGGAAGTGGATCTTTCGGAAGCGTATTTGAGGCGATCACTGACGATGGCTTCTTTTTTGCTGTAAAGGAGGTTTCCTTGCAAACTCAAGGAAGTGATGGAAGGGAGAGCATTCTTCAATTAGAGCAGGAGATTTCTCTTTTAAGTCAGTTCGAACATGAGAACATAGTTCGGTATCTTGGAACAGACAAGGACAGAAATAAATTATATATCTTCCTTGAGCTCCTTCCAAAAGGCTCATTAGCAAAGCTGTATCAAAGGTTTCGCTTGAAGAAGTCTCAAGTTTCAGCATATACGAGGCAGATTTTGAACGGGTTAAATTATCTTCATAAACAGAATATAGTTCACAGAGATATCAAATGTGCTAATATTTTGGTCGATGGAAGTGGATCAGTGAAGCTTGCAGATTTTGGGCTGGCAAAGACAATCAAATTTAATGATGTTAATTCATTTAAAGGAACTGCATACTGGATGGCTCCTGAGGTTGTAAATCTACAGACTCGTGGCTATGGGCTTCCAGCTGATATTTGGAGTCTTGGATGTACAGTGTTAGAGATGTTAACTGGTCGACCTCCGTTTTCTCAGTTAAATGCCGTGCAAGCATTATTTCAGATTGGGAATAAGGAACTCCCTCCACTTCCTCATTCCTTGTCTGGCGATGCCCGAGATTTCATCCTTAGTTGCTTGCAAGTTGACCCACATAGCCGGCCTAATGCGTCTGAACTTTTAAGTCATCCATTTGTCAGGATGCCGATTTGA 1635 43.12 METWLKPFWPKLDRRNAVKNFDQPSSSSSSSSSSDSSLRTRSLDLYPTSFRVRGDDGELDIICGCLGISSPDDFAIPAAEWEALRLDYSSRSRSKHQNGDDLEFRRLLRKAKNDFQSQFDVNSNLIGGVENGRRVGDEDGKFNSILSNENKAMDDRGECIYVVRPPVLSSPPGKLRSVVDDVNSTWEICRSFAPKDDKHPACNLSQAEENKARFKDGERYDGGVCGSGLFGPLHSTNTTNGYSDELSLGGPTNVNDNAAQLESKFVSEEVHYFTPNGKFKRKNSSSWQKCDLLGSGSFGSVFEAITDDGFFFAVKEVSLQTQGSDGRESILQLEQEISLLSQFEHENIVRYLGTDKDRNKLYIFLELLPKGSLAKLYQRFRLKKSQVSAYTRQILNGLNYLHKQNIVHRDIKCANILVDGSGSVKLADFGLAKTIKFNDVNSFKGTAYWMAPEVVNLQTRGYGLPADIWSLGCTVLEMLTGRPPFSQLNAVQALFQIGNKELPPLPHSLSGDARDFILSCLQVDPHSRPNASELLSHPFVRMPI 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7682873 7687361 - Bda012288.1 Bda15g00458 22153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00458 544 Pfam Protein kinase domain 289 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00458 544 MobiDBLite consensus disorder prediction 19 39 - -
Bda15g00458 544 Gene3D Transferase(Phosphotransferase) domain 1 284 544 - -
Bda15g00458 544 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 133 541 - -
Bda15g00458 544 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 10 99 - -
Bda15g00458 544 SMART serkin_6 287 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00458 544 ProSitePatterns Protein kinases ATP-binding region signature. 293 315 IPR017441 GO:0005524
Bda15g00458 544 ProSiteProfiles Protein kinase domain profile. 287 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00458 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Bda15g00458 544 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 133 541 - -
Bda15g00458 544 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 10 99 - -
Bda15g00458 544 SUPERFAMILY Protein kinase-like (PK-like) 273 541 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00518 Bda-Chr3:4354665 Bda15g00458 Bda-Chr15:7682873 8.02E-28 dispersed
Bda11g00746 Bda-Chr11:7499350 Bda15g00458 Bda-Chr15:7682873 1.51E-128 dispersed
Bda15g00458 Bda-Chr15:7682873 Bda15g00714 Bda-Chr15:10541285 3.91E-78 dispersed
Bda15g00458 Bda-Chr15:7682873 Bda01g01408 Bda-Chr1:49972122 1.38E-146 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70099 PF00069 Pkinase 2.40E-70 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00458 K13414 - vvi:100241228 493.041