Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00480 ATGTTGCAGTTTTCGATTCAGGGAGTGAGGAAGTTGACAGTGTTGAGGAGTCAGCGCTTCGCTTTTGGGAAATTTCATTTATCTACCGCCGCGGAGCCATCATCCAGCACCGGTAATCCTCCGAGGGTTCCAAATCTTATTGGTGGGAGATTTGTTGATTCCGAATCATCAGCATTCATCGATGTTGTAAACCCAGCAACGCAAGAAATTGTTTCTCAAGTTCCATTGACTACAACTGAAGAATTTAAAGCTGCAGTATCTGCAGCAAAGAAAGCTTTTCCATCATGGCGTAATACCCCAGTTACAACCCGTCAGCGAATAATGCTCAAACTCCAAGAGCTTATTCGAAAAAACATGGACAAGCTTGCCCAGAATATTACAACTGAACAAGGGAAAACATTGAAGGATGCACATGGAGATGTGTTTCGTGGGCTAGAGGTGGTTGAACATGCTAGTGGGATGGCAACCCTACAAATGGGCGAGTATGTCTCCAACGTGGCTCATGGAATTGACACCTACAGCATTCGAGAGCCTTTAGGCGTGTGTGCTGGGATTTGTCCATTCAACTTTCCGGCAATGATTCCCTTATGGATGTTTCCAGTCGCAGTAACATGTGGGAATACCTTTGTTTTAAAGCCCTCTGAAAAGGATCCAGGGGCATCTATAATTCTGGCTGAGTTGGCAAAAGAGGCTGGGTTACCTGATGGTGTCTTAAACATTGTGCACGGCACCAATGAGATTGTTAACGCCATTTGTGATGATGACAACATAAGAGCTGTTTCATTTGTGGGTTCTAATACTGCGGGAATGCACATTTATTCAAGAGCATCAGCTAAAGGAAAACGAGTTCAGTCTAATATGGGGGCCAAGAATCACGCTATTGTAATGCCTGACGCAAGTATAGACGCTACTTTGAATTCTTTAGTCGCTGCTGGTTTTGGTGCTGCAGGACAAAGATGCATGGCGCTTAGCACGGCTATATTTGTTGGTGGCTCAGAGGCATGGGAGAAAAAACTTGTGGAACGAGCCAATGCTTTGAAGGTAAACTCTGGAATGGAATCTGATGCCGATCTTGGTCCAGTAATTAGCAAACAGGCAAAAGAAAGAATCTGCAGATTAATTGAATCTGGTGTCCAAAGTGGAGCAAGGATACCGCTTGATGGGAGAAGTATTGTGGTTCCTCGATATGAACATGGCAATTTCATAGGCCCTACTATCTTATCAGAGGTTGCAGAAAACATGGAGTGCTACAAAGAGGAGATTTTTGGCCCAGTTCTTCTTTGCATGCAGGCAGAAAGCCTAGACGAAGCCATAAGCATAGTCAACAGAAACAAATATGGAAACGGAGCTGCAATATTCACTACATCTGGTGTAGCTGCAAGGAAGTTCCAGAATGAGATTGAGGCTGGACAGGTCGGGATCAATGTTCCGATTCCAGTGCCATTGCCATTTTTCTCCTTCACTGGCTCCAAATCATCTTTTGCTGGGGACCTCAACTTCTATGGCAAAGCCGGTGTTAATTTTTACACACAGATCAAAACAGTGACCCAACAATGGAAAGACCTGTCTGATGGAAGTGGAGTCAGCCTTGCAATGCCAACTTCTATTTCTCAAAAATAG 1620 44.38 MLQFSIQGVRKLTVLRSQRFAFGKFHLSTAAEPSSSTGNPPRVPNLIGGRFVDSESSAFIDVVNPATQEIVSQVPLTTTEEFKAAVSAAKKAFPSWRNTPVTTRQRIMLKLQELIRKNMDKLAQNITTEQGKTLKDAHGDVFRGLEVVEHASGMATLQMGEYVSNVAHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIILAELAKEAGLPDGVLNIVHGTNEIVNAICDDDNIRAVSFVGSNTAGMHIYSRASAKGKRVQSNMGAKNHAIVMPDASIDATLNSLVAAGFGAAGQRCMALSTAIFVGGSEAWEKKLVERANALKVNSGMESDADLGPVISKQAKERICRLIESGVQSGARIPLDGRSIVVPRYEHGNFIGPTILSEVAENMECYKEEIFGPVLLCMQAESLDEAISIVNRNKYGNGAAIFTTSGVAARKFQNEIEAGQVGINVPIPVPLPFFSFTGSKSSFAGDLNFYGKAGVNFYTQIKTVTQQWKDLSDGSGVSLAMPTSISQK 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7969205 7984544 - Bda012309.1 Bda15g00480 22175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00480 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 47 496 IPR016162 GO:0016491
Bda15g00480 539 SUPERFAMILY ALDH-like 40 521 IPR016161 GO:0016491
Bda15g00480 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 288 488 IPR016163 GO:0016620
Bda15g00480 539 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 45 519 IPR010061 GO:0004491
Bda15g00480 539 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 30 536 IPR010061 GO:0004491
Bda15g00480 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 313 324 IPR016160 GO:0016491
Bda15g00480 539 Pfam Aldehyde dehydrogenase family 51 515 IPR015590 GO:0016491
Bda15g00480 539 CDD ALDH_F6_MMSDH 43 519 IPR010061 GO:0004491
Bda15g00480 539 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 30 536 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00480 Bda-Chr15:7969205 Bda06g00225 Bda-Chr6:3830672 7.84E-67 dispersed
Bda15g00480 Bda-Chr15:7969205 Bda13g00888 Bda-Chr13:10567516 4.56E-160 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00480 K00140 - egr:104419873 900.197