Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00485 CAGGGATATGATGTTATTAAACAAAAGAACCCACTTAGGGGATATTCTCCTGCTACTTCACAATTTTGTAGCCCTTCGTTTAGTTTGACATATCACCACTGGAAGCAGGTGGTCTCTCCTTCATTTAGACTATATTGCCAGATAAGTCGTTGCTCTCGAGTTGCCAACATTGGCAGGCCTTCACTAATTTCCTCAGTATGTGGTTGGAGAGAGTGTTATTTATCCAACTATGCACCGTTCATCAGGAGTAGACCTCGGATTCATGCGGCCCTTGATGTCGCAAGTGCTATTGATGTAATTAATGATTTAGGATTGGATACACTAACATTTTTAGCCGTGACAGTGCTTGTTGTTCCTGCATTCAGAATTGTTAAAGCTAGCCCAATACTTGGTTTCTTCTTTGCTGGAATTGTGCTGAACCAATTTGGCGCGATCAGAAATCTTACTGATGTTAAAGTCCTTTCTGAGTGGGGAATCCTTTTTCTGCTGTTTGAAATGGGTTTAGAACTCTCTTTTGCCCGTTTGAAGGCTCTGGCAATATTTGCCTTCGGCATGGGATTGCCTCAGGTGGTGCTATCCACTCTTGCTTTCACTGCCTTTGAACTCCCTCCTAATGGAGCCATTGGAACAAGAATCCTTGAGTTTCTTTTTCACTCGAGGCCTGATTTGGTTAACATAAGAAGTGTTGATGAAGCTATAGTGATTGGTGCTGCACTCTCGTTGTCTTCTTCAGCTTTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAGCTTCCGACAAGATTTGGATCAGCAACGTTGGGGATACTTCTTCTACAGGACATTGCAGTTGTCCCCCTCTTAGTCATTCTCCCAGTCTTAGAGAGCCAGAATTTGGTCCAGGAAAGTATCTGGCCAATGCTTGCCCAAGAAAGCTTAAAGGCTTTGGGTGGACTGGGTCTGCTTTCTCTTGGAGGAAAATTTCTTCTTAGGAGAGTCTTTGAGGTAGTTGCTGAAGCCAGGAGCTCTGAAGCTTTTGTTGCTCTCTGCTTGCTGACAGTTGCTGGGACTTCTCTTATTACCCAGAAGTTGGGCTTCAGTGATACGCTCGGAGCATTTTTAGCTGGAGCGATCTTAGCAGAAACAAACTTTCGAACGCAGATTGAAGCAGATATTAGGCCATTCCGAGGCTTACTGCTGGGTTTATTTTTTGTGACTACTGGAACTTCCATTGACATGCAGGTTCTTTTCCGAGAGTGGCCGAATGTACTTTCACTTTTGGCAGGACTAATAGTAATAAAGACAATGATAATAACAGCAATAGGTCCCCGTGTTGGATTAACTTTACAAGAAAGTGTAAGAATTGGATTACTTCTTTCTCAGGGAGGCGAGCTTGGAGTGTTACCTCTTGAGCTTAACAAGCTTCTTATCATCGTTGTTGTGCTATCCATGGCATTAACTCCATTGCTTAATGAGGCTGGAAGAAAGGCTGCTGAATTGATAGACGGCAAGGTTGAACCAGAAAGTAAAACTAAGGAGACTGTAAATTTTAACGCAACGGAGCCTGTTGTGATTCTTGGGTTTGGGCAAATGGGTCAGGTTCTAGCAAATTTCTTGTCTGCACCATTGGCTTATGGAGAAGATGGTAATGCTGTAGGATGGCCCTATGTTGCTTTTGATCTTGATCCTTCTGTTGTGAAGGCATCTAGAAAACTTGGTTTTCCTATTCTCTATGGGGATGGATCACGCCCTATAGTTTTGCAATCTGCTGGAATTTCTTCTCCCAAAGCTGTAATGATTATGTACACAGGGCGTAAGAGAACGATCGAGGCTGTTCAGAGGCTTCGAATTGCATTCCCTGCAATTCCAATTTATGCCAGAGCTAAAGACCTCATGCATCTGTTAGATCTGAAGAAAGCAGGTGCAACCGATGCTATTCTTGAAGATGCAGAGACAAGTTTACAATTGGGTTCTAGGCTTTTGAAAGGGCTAGGTGTCATGTCAGATGATGTGAGTTTCCTAAGTCAGCTTGTTCGAGACTCCATGGAGTCACAAGCTCAAGAAGCACTCAGCAAAACCAATGAGCGGGAGCGGGAGTTAGATATTATGCAGCCGTTACAGGTAAGGGTTGCTGACTTAACCGAAGGCCGGCCACCTCGTTCTCCAGCTTCACGAGAAGACGAACTTTTAAGGGTGAACAAGGAAGATGTTTCCCATATCCTGAGGCTTCAAGAGGATGCAAATCAAGGCAAAGTTGAGGCCAGAATCGGAAACATGGACGACGAGAATGGGAAAGGAGTTTTGTATTGTGAACTTGGAATAGACAACAAGTTTGATGATAAATCTGAAGATGAAGTGAAGAACTTGGTGGACTCATCAATCCCTTGCCTCACAGTTGGGGATGAAACTTGA 2388 43.76 QGYDVIKQKNPLRGYSPATSQFCSPSFSLTYHHWKQVVSPSFRLYCQISRCSRVANIGRPSLISSVCGWRECYLSNYAPFIRSRPRIHAALDVASAIDVINDLGLDTLTFLAVTVLVVPAFRIVKASPILGFFFAGIVLNQFGAIRNLTDVKVLSEWGILFLLFEMGLELSFARLKALAIFAFGMGLPQVVLSTLAFTAFELPPNGAIGTRILEFLFHSRPDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPVLESQNLVQESIWPMLAQESLKALGGLGLLSLGGKFLLRRVFEVVAEARSSEAFVALCLLTVAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQVLFREWPNVLSLLAGLIVIKTMIITAIGPRVGLTLQESVRIGLLLSQGGELGVLPLELNKLLIIVVVLSMALTPLLNEAGRKAAELIDGKVEPESKTKETVNFNATEPVVILGFGQMGQVLANFLSAPLAYGEDGNAVGWPYVAFDLDPSVVKASRKLGFPILYGDGSRPIVLQSAGISSPKAVMIMYTGRKRTIEAVQRLRIAFPAIPIYARAKDLMHLLDLKKAGATDAILEDAETSLQLGSRLLKGLGVMSDDVSFLSQLVRDSMESQAQEALSKTNERERELDIMQPLQVRVADLTEGRPPRSPASREDELLRVNKEDVSHILRLQEDANQGKVEARIGNMDDENGKGVLYCELGIDNKFDDKSEDEVKNLVDSSIPCLTVGDET 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8010253 8023654 + Bda012314.1 Bda15g00485 22180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00485 795 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 65 723 - -
Bda15g00485 795 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 514 657 IPR036291 -
Bda15g00485 795 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 65 723 - -
Bda15g00485 795 Pfam Sodium/hydrogen exchanger family 109 459 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bda15g00485 795 Gene3D - 514 685 - -
Bda15g00485 795 ProSiteProfiles RCK N-terminal domain profile. 514 646 IPR003148 GO:0006813
Bda15g00485 795 Pfam TrkA-N domain 515 638 IPR003148 GO:0006813
Bda15g00485 795 Gene3D - 102 491 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00262 Bda-Chr11:3058379 Bda15g00485 Bda-Chr15:8010253 5.87E-86 dispersed
Bda13g00796 Bda-Chr13:9399252 Bda15g00485 Bda-Chr15:8010253 2.81E-62 dispersed
Bda15g00485 Bda-Chr15:8010253 Bda01g02293 Bda-Chr1:59663877 1.29E-13 dispersed
Bda15g00485 Bda-Chr15:8010253 Bda13g01606 Bda-Chr13:39592533 4.81E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00485 - - jre:109008703 1072.77