Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00491 ATGGATTTCCCGAACGGCAACAGAGCCGAAGCTCTCCGATGGTTCAACATAGCTGAGAGGCTTCTGGGTGCTCGAGATTTATTTGGGGCCAAGAGCTTCGCGATCCGAGCTCGAGATTCCGACCCAATTGTCCTCGACGCTGCCAATCGAGTCATCGCCGTCGCTGACACTCTCCTCGCATCTGAGTCTCCGATCATCAACCAATTCGATTGGTATGGGATTCTCCAACTCCCTCGCCCCACTCAGAGTATCGAGCTCATTGCCAGTCAGTACCGGCGACTCGCTCTTGTCCTGAACCCAGAGACGAATCACGCCGCCTACGCCGACCACGCTTTCAAGCTCGTAACTGATGCGTGGTTTGTGCTCTCTAACCCTTTGAGGAAAGCTCTCTACGACAACGAACTCAATCTCTACTTAAAGAACGATGTTCCTGCTGCCGGGTCGGCTCAGAAGCAGAAGTCTCCGGAGAAACCACCACCACCACGGCAGCCGCCTCAGCAGCAGCAGCAGTCGCCGCAACAGCTGCCCGCCCAACTACAACAGGAATCGCGGCCAACTCAGCCTCCGAGACAACAAGGGGTAGAGCAACCGAATCAGCCTGCGGGAAAGAGTCTCAATGCTGCTTCGGATGGGAAGGTGACAGCGGAAGAAGAGAGGGGAAATGCTAGCAATGTGACTGAACCCACTCAGAAAACTCCCCCAACTCAGGATGCTGAGGGTTTGGACGCCAAGTCGACCGGGCCAACTTTCTGGACTGCTTGTCCTTACTGTTTTAATCTTTTTGAGTATCCTGAGGTCTATGAAGATTGTGTTCTCAAGTGCCAGAATTGTCACAAGGCATTCCAAGCTGTGACATTACCTCCTCCTCCAATTTCAGACAAGGAAGATTATTACTGTTGTTGGGGTTTCATCCCATTGGGGATATCAAGTAATGTTAAACAATCAGGTCGGAATTGGAATCCTATTTCGTCAATGTTCGTTTGTCCTTTGCAAGGTCAAGGGAAGGGAAAGAAGGAATCTGCCCCCAAAAAATCTAGCCCGAGGTTTTACTATCACGAAGATGATGACGACGATCTGTATGTAGAAGTTTCGAATCCAAGTGGGAGCTCCGATGAAGAATGGGAGAGTGGAAGGAGGAAGAAGAAGGCCAAGCGAGGTTCTGCTAATAAAAACGAAAAGAAGGCTTCAACTGAGAGAGTTAAAAAGGGGAGCCAAGTGAGTGGTGGCAACGAAAATGGGGGTGGCGTCGAGGAATCGGATGGGGCCAAATTTGTCGCGGGGAAGTCGGGATTGTCAAATGCATCAAAGGCTGATTCTAGTAAGAAAGGGGCAGCAACTAGTAATGCAAAGAGGCATAAGGGTAAAGGGGCAACTGAATTGGGGAAGTTGGATTTGAATGTGGAGTTTAGCAACGAGGTCGAAGAGCCTGGCCATAGAATCAGCGAGGGGAACGAAACGGGAAATGGTGTGGAGGATAACATATTTTTCGAGGGTCTCGATGAATTCCTGAGTAGTCTTCCGATTCTTAATGTCGTGGATGATGATAAAGTCAAGACTAGCTTGTGA 1566 50.06 MDFPNGNRAEALRWFNIAERLLGARDLFGAKSFAIRARDSDPIVLDAANRVIAVADTLLASESPIINQFDWYGILQLPRPTQSIELIASQYRRLALVLNPETNHAAYADHAFKLVTDAWFVLSNPLRKALYDNELNLYLKNDVPAAGSAQKQKSPEKPPPPRQPPQQQQQSPQQLPAQLQQESRPTQPPRQQGVEQPNQPAGKSLNAASDGKVTAEEERGNASNVTEPTQKTPPTQDAEGLDAKSTGPTFWTACPYCFNLFEYPEVYEDCVLKCQNCHKAFQAVTLPPPPISDKEDYYCCWGFIPLGISSNVKQSGRNWNPISSMFVCPLQGQGKGKKESAPKKSSPRFYYHEDDDDDLYVEVSNPSGSSDEEWESGRRKKKAKRGSANKNEKKASTERVKKGSQVSGGNENGGGVEESDGAKFVAGKSGLSNASKADSSKKGAATSNAKRHKGKGATELGKLDLNVEFSNEVEEPGHRISEGNETGNGVEDNIFFEGLDEFLSSLPILNVVDDDKVKTSL 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8051920 8053485 + Bda012319.1 Bda15g00491 22186

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00491 521 CDD DnaJ 70 124 IPR001623 -
Bda15g00491 521 PANTHER BNAANNG15130D PROTEIN 1 519 - -
Bda15g00491 521 MobiDBLite consensus disorder prediction 332 463 - -
Bda15g00491 521 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 519 - -
Bda15g00491 521 SUPERFAMILY Chaperone J-domain 63 137 IPR036869 -
Bda15g00491 521 MobiDBLite consensus disorder prediction 219 236 - -
Bda15g00491 521 Pfam DnaJ domain 70 132 IPR001623 -
Bda15g00491 521 MobiDBLite consensus disorder prediction 337 355 - -
Bda15g00491 521 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Bda15g00491 521 MobiDBLite consensus disorder prediction 168 205 - -
Bda15g00491 521 MobiDBLite consensus disorder prediction 472 491 - -
Bda15g00491 521 Gene3D DnaJ domain 67 195 IPR036869 -
Bda15g00491 521 SMART dnaj_3 69 127 IPR001623 -
Bda15g00491 521 MobiDBLite consensus disorder prediction 146 244 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00491 - - - csv:101202983 479.944
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g01578 Bda-Chr14:33295088 Bda15g00491 Bda-Chr15:8051920 1.15E-122 dispersed
Bda15g00491 Bda-Chr15:8051920 Bda06g00778 Bda-Chr6:10787318 1.55E-26 dispersed
Bda15g00491 Bda-Chr15:8051920 Bda03g00457 Bda-Chr3:3955831 2.48E-26 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g955 . . . . . . . Bma12g00378 Cmo19g00493 Cmo11g01464 . . . . . Cpe04g00370 Cpe15g00374 Bhi05g00935 . . . . . . . . . . . . . . . . . . . . Cme01g00203 . . Bda15g00491 . . . . . . . . Cma11g01667 Cma19g00476 Car11g01178 Car19g00351 . . . . . . . . . Cla09g01575 Cam09g1578 Cec09g1732 Cco09g1794 . . Cre09g1623 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008143 2 1 2 1 0 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 0 0 2 1 0 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda15g00491 Bda_Chr15 FPKM 4.752686 5.663423 3.574848 3.442973 3.097045 3.35629 3.813153 5.075509 4.576298