Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00495 ATGGCTCCCTCACACTGCATTGTTATTCTCTTTCTCTCTCTACTGCTGGGGGTAAAGTCGTCGTCACCCTCCCTGGGAAGCTCGAGAAAGCTGGCTGCATTGGTCGAGCAGCAGCCGTTGGTATTGAAATATCACAACGGAGCTCTTCTGAAGGGCCACATCACCCTGAACATTGTATGGTACGGCCACTTCACTCCAGTCCAGCGCTCTACGATTCTTGATTTTATTCAGTCCCTCGACTATCAGGGAGCCCCACTGCCCTCCGTTTCGTCGTGGTGGAAAACGACGGACAAGTACGAAACTGGGTCGTCTAGTCTGGTGATCGGGAAGCAAATTCTAGACGAGACTTACAGCTTGGGAAAGAATCTGAAGACCTCTGACTTGGTGGGTTTGGCCGGAAAATTCAATCGCCTCGATTCTGTGAGTTTAGTTTTGACTGCGAAGGACGTGGCTGTTGAGGGTTTCTGCATGAGCAGGTGTGGAACGCACGGATCGATGCCGGGGAAGACCAGATTCGCATACGTCTGGGTTGGAAATTCGGAAACCCAGTGCCCCGGACAGTGCGCCTGGCCGTTTCACCAGCCCATTTATGGCCCTCAGACGCCGCCGTTGGTGGCGCCCAACGCCGACGTCGGAGTGGACGGGATGATCATAAACCTGGCCACGCTTCTGGCCGGTACCGTCACCAATCCTTTCAACAACGGATACTTCCAGGGCCCGGCCGCCGCACCTCTGGAGGCGGTGTCCGCATGCACGGGAGTATTCGGATCCGGATCATACCCTGGGTATCCAGGTCAAGTCCTGGTAGATACGAGCAGCGGAGGGAGTTACAACGCGAACGGAATCGGTGGCCGGAAGTATCTGTTACCGGCCATGTGGGACCCAGAAACATTGGCCTGTAAAACACTCGTATGA 915 55.08 MAPSHCIVILFLSLLLGVKSSSPSLGSSRKLAALVEQQPLVLKYHNGALLKGHITLNIVWYGHFTPVQRSTILDFIQSLDYQGAPLPSVSSWWKTTDKYETGSSSLVIGKQILDETYSLGKNLKTSDLVGLAGKFNRLDSVSLVLTAKDVAVEGFCMSRCGTHGSMPGKTRFAYVWVGNSETQCPGQCAWPFHQPIYGPQTPPLVAPNADVGVDGMIINLATLLAGTVTNPFNNGYFQGPAAAPLEAVSACTGVFGSGSYPGYPGQVLVDTSSGGSYNANGIGGRKYLLPAMWDPETLACKTLV 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8063702 8064616 - Bda012323.1 Bda15g00495 22190

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00495 304 PANTHER PROTEIN EXORDIUM-LIKE 2 27 304 - -
Bda15g00495 304 Pfam Phosphate-induced protein 1 conserved region 42 303 IPR006766 -
Bda15g00495 304 PANTHER PROTEIN EXORDIUM-LIKE 5 27 304 IPR006766 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00495 - - - jre:108980006 474.552
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00715 Bda-Chr8:7961980 Bda15g00495 Bda-Chr15:8063702 4.26E-157 dispersed
Bda11g00770 Bda-Chr11:7756593 Bda15g00495 Bda-Chr15:8063702 3.89E-125 dispersed
Bda11g00771 Bda-Chr11:7758808 Bda15g00495 Bda-Chr15:8063702 8.88E-123 dispersed
Bda13g01397 Bda-Chr13:36664072 Bda15g00495 Bda-Chr15:8063702 2.94E-119 dispersed
Bda15g00495 Bda-Chr15:8063702 Bda06g01115 Bda-Chr6:39650043 2.57E-164 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g1017 . . . . . . . Bma12g00370 . . . . . . . . . . . . . . . . Cla10g00891 . Cec10g0954 . . . . Cone12ag0978 . . . . . . . . . Bda15g00495 . . . . . . Cmo04g00665 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004892 4 0 2 1 3 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda15g00495 Bda_Chr15 FPKM 12.151819 13.182792 8.830795 8.160465 18.05504 15.407964 16.695793 7.272309 6.459983