Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00504 ATGTCTGAGCTAGATTTATCTAAGAAAGTAGCGGATAGGTACCTGAAGCGGGAGGTCCTCGGTGAAGGTACTTATGGAGTTGTCTATAAAGCCATTGATACCAAGACAGACCAAACAGTTGCAATTAAGAAAATTCGATTGGGGAAACAGAAGGAAGGCGTAAATTTCACTGCTCTCCGTGAGATAAAACTGCTTAAAGAGCTTAAGGATCCTAATATCATAGAGTTAATAGATGCATTCCCTCATAAGGGGAACTTGCATCTCGTATTTGAATTCATGGAGACTGACCTTGAAGCTGTCATACGAGATCGAAACATATTTCTCTCTCCGGCTGACATAAAATCATACCTACAGATGACATTGAAAGGTCTTGCCTTTTGCCACAAGAAATGGGTTTTACACAGGGATATGAAGCCTAACAATTTGTTGATAGGATCTAATGGCCAGCTAAAATTAGCAGATTTTGGTTTGGCACGAATATTTGGGAGCCCTGATCGTAAATTCACTCATCAGGTATTTGCTCGATGGTATAGAGCGCCTGAGTTATTATTTGGGACCAAACAATATGGATCTGGGGTAGATGTCTGGGCTGCAGCTTGTATTTTCGCTGAACTTCTCCTTCGCCGACCATTCCTTCAAGGTTCCAGTGACATTGATCAATTAGGAAAAATTTTTGCTGCCTTTGGGACTCCAACACCTCCACAGTGGCCAGATATGGTTTTTTTGCCGGATTATGTTGAGTACCAATATGTTCCTGCACCTCCTTTACGATCATTATTTCCAATGGCTAGTGATGATGCATTAGACCTTCTGGCAAAGATGTTTTCTTATGACCCGAACGCTAGAATATCAGTTCAACAGGCATTAGAGCACAGATACTTTGCATCTGCACCACTGCCGACTGATCCTTATAAACTCCCTAGACCTGCACCAAAGAGGGAGGTTGTGAGTACAAATGAAGGTCCGACGGTTCTCTCACCTCCAAGGAAATCAAGGAGAGTGATGCCAGACCGATTTGAAGGAAATGGATTTCGAGGTGATAAGACTGACAATCGTGGAACTGATGTTGGGGTAGCCGTTGGGGCAAGCAAGAACGAACTGGTGCCTATGTCAGTGGATTTTTCTATTTTTGGTTTAAAACCTTCAAATAGACCAACAATTAACAGCTCTGATAGATCACATCTTAAGAGGAAGCTGGATCTTGAATTCCAACAA 1215 42.3 MSELDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTDQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAPELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPPQWPDMVFLPDYVEYQYVPAPPLRSLFPMASDDALDLLAKMFSYDPNARISVQQALEHRYFASAPLPTDPYKLPRPAPKREVVSTNEGPTVLSPPRKSRRVMPDRFEGNGFRGDKTDNRGTDVGVAVGASKNELVPMSVDFSIFGLKPSNRPTINSSDRSHLKRKLDLEFQQ 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8133713 8136846 - Bda033302 Bda15g00504 22199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00504 405 CDD STKc_CDK7 13 307 IPR037770 GO:0005675|GO:0008353|GO:0070985
Bda15g00504 405 PANTHER CELL DIVISION PROTEIN KINASE 9 350 - -
Bda15g00504 405 MobiDBLite consensus disorder prediction 390 405 - -
Bda15g00504 405 SUPERFAMILY Protein kinase-like (PK-like) 9 301 IPR011009 -
Bda15g00504 405 MobiDBLite consensus disorder prediction 331 352 - -
Bda15g00504 405 MobiDBLite consensus disorder prediction 379 405 - -
Bda15g00504 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Bda15g00504 405 MobiDBLite consensus disorder prediction 303 352 - -
Bda15g00504 405 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Bda15g00504 405 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00504 405 PANTHER CYCLIN-DEPENDENT KINASE D-2 9 350 - -
Bda15g00504 405 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
Bda15g00504 405 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
Bda15g00504 405 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00504 405 SMART serkin_6 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00139 Bda-Chr7:1727290 Bda15g00504 Bda-Chr15:8133713 1.00E-65 dispersed
Bda15g00504 Bda-Chr15:8133713 Bda02g00600 Bda-Chr2:46856943 8.64E-77 dispersed
Bda15g00504 Bda-Chr15:8133713 Bda14g00385 Bda-Chr14:2781591 1.88E-88 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70100 PF00069 Pkinase 2.00E-71 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00504 K02202 - qsu:112031301 712.605