Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00504 | ATGTCTGAGCTAGATTTATCTAAGAAAGTAGCGGATAGGTACCTGAAGCGGGAGGTCCTCGGTGAAGGTACTTATGGAGTTGTCTATAAAGCCATTGATACCAAGACAGACCAAACAGTTGCAATTAAGAAAATTCGATTGGGGAAACAGAAGGAAGGCGTAAATTTCACTGCTCTCCGTGAGATAAAACTGCTTAAAGAGCTTAAGGATCCTAATATCATAGAGTTAATAGATGCATTCCCTCATAAGGGGAACTTGCATCTCGTATTTGAATTCATGGAGACTGACCTTGAAGCTGTCATACGAGATCGAAACATATTTCTCTCTCCGGCTGACATAAAATCATACCTACAGATGACATTGAAAGGTCTTGCCTTTTGCCACAAGAAATGGGTTTTACACAGGGATATGAAGCCTAACAATTTGTTGATAGGATCTAATGGCCAGCTAAAATTAGCAGATTTTGGTTTGGCACGAATATTTGGGAGCCCTGATCGTAAATTCACTCATCAGGTATTTGCTCGATGGTATAGAGCGCCTGAGTTATTATTTGGGACCAAACAATATGGATCTGGGGTAGATGTCTGGGCTGCAGCTTGTATTTTCGCTGAACTTCTCCTTCGCCGACCATTCCTTCAAGGTTCCAGTGACATTGATCAATTAGGAAAAATTTTTGCTGCCTTTGGGACTCCAACACCTCCACAGTGGCCAGATATGGTTTTTTTGCCGGATTATGTTGAGTACCAATATGTTCCTGCACCTCCTTTACGATCATTATTTCCAATGGCTAGTGATGATGCATTAGACCTTCTGGCAAAGATGTTTTCTTATGACCCGAACGCTAGAATATCAGTTCAACAGGCATTAGAGCACAGATACTTTGCATCTGCACCACTGCCGACTGATCCTTATAAACTCCCTAGACCTGCACCAAAGAGGGAGGTTGTGAGTACAAATGAAGGTCCGACGGTTCTCTCACCTCCAAGGAAATCAAGGAGAGTGATGCCAGACCGATTTGAAGGAAATGGATTTCGAGGTGATAAGACTGACAATCGTGGAACTGATGTTGGGGTAGCCGTTGGGGCAAGCAAGAACGAACTGGTGCCTATGTCAGTGGATTTTTCTATTTTTGGTTTAAAACCTTCAAATAGACCAACAATTAACAGCTCTGATAGATCACATCTTAAGAGGAAGCTGGATCTTGAATTCCAACAA | 1215 | 42.3 | MSELDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTDQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAPELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPPQWPDMVFLPDYVEYQYVPAPPLRSLFPMASDDALDLLAKMFSYDPNARISVQQALEHRYFASAPLPTDPYKLPRPAPKREVVSTNEGPTVLSPPRKSRRVMPDRFEGNGFRGDKTDNRGTDVGVAVGASKNELVPMSVDFSIFGLKPSNRPTINSSDRSHLKRKLDLEFQQ | 405 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 8133713 | 8136846 | - | Bda033302 | Bda15g00504 | 22199 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00504 | 405 | CDD | STKc_CDK7 | 13 | 307 | IPR037770 | GO:0005675|GO:0008353|GO:0070985 | |
Bda15g00504 | 405 | PANTHER | CELL DIVISION PROTEIN KINASE | 9 | 350 | - | - | |
Bda15g00504 | 405 | MobiDBLite | consensus disorder prediction | 390 | 405 | - | - | |
Bda15g00504 | 405 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 301 | IPR011009 | - | |
Bda15g00504 | 405 | MobiDBLite | consensus disorder prediction | 331 | 352 | - | - | |
Bda15g00504 | 405 | MobiDBLite | consensus disorder prediction | 379 | 405 | - | - | |
Bda15g00504 | 405 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 132 | 144 | IPR008271 | GO:0004672|GO:0006468 | |
Bda15g00504 | 405 | MobiDBLite | consensus disorder prediction | 303 | 352 | - | - | |
Bda15g00504 | 405 | Gene3D | Phosphorylase Kinase; domain 1 | 4 | 94 | - | - | |
Bda15g00504 | 405 | Pfam | Protein kinase domain | 16 | 294 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda15g00504 | 405 | PANTHER | CYCLIN-DEPENDENT KINASE D-2 | 9 | 350 | - | - | |
Bda15g00504 | 405 | Gene3D | Transferase(Phosphotransferase) domain 1 | 95 | 310 | - | - | |
Bda15g00504 | 405 | ProSitePatterns | Protein kinases ATP-binding region signature. | 20 | 44 | IPR017441 | GO:0005524 | |
Bda15g00504 | 405 | ProSiteProfiles | Protein kinase domain profile. | 14 | 294 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda15g00504 | 405 | SMART | serkin_6 | 14 | 294 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00139 | Bda-Chr7:1727290 | Bda15g00504 | Bda-Chr15:8133713 | 1.00E-65 | dispersed | |
Bda15g00504 | Bda-Chr15:8133713 | Bda02g00600 | Bda-Chr2:46856943 | 8.64E-77 | dispersed | |
Bda15g00504 | Bda-Chr15:8133713 | Bda14g00385 | Bda-Chr14:2781591 | 1.88E-88 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
70100 | PF00069 | Pkinase | 2.00E-71 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00504 | K02202 | - | qsu:112031301 | 712.605 |