Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00506 | ATGTCTTCCATTTCCAGCGACGACGAAGATGAGAACTTGTCAGGTGAAGAAGCCGAAGGCGGTTTTGATGAGGACATTGAAGCCCTAAGGCGAGCATGCTTGCTCACCGGGGCGGATCCTGATGATTGTAGTTATCAGTCTTTGTCTGTCGGCGTCGGCAACGCTTGCTCCGGCGGACTTGTTCCTGTTTGTGAAAGTGATGGCGATGATGATCTCGAACTTGTGCGTAGCATTCGGGAACGGTTCTCGATGTCTAACGAGGAGGATCAACATCTGTCTGTGAAACCTATAAATACTATTCCTCCTGTGACGTCCGACGACGAGGAGGACGATTTTGAAACGCTCCGGGCCATTCAGCGACGCTTTGCGGCCTATGATAAAGGTAGGCTTTTGAAGGAATGTTACAATAAATTATCTAGCATTTCCGGGATAGAGTGCCCAAACTCAGAAGAACTTTGTAATACTTCCCATAACCCAAGTAATGTGGATCAGAATTCTTCCTCCGCAATATGGAAACTACCTAATGCTTACCAGTCATTGACATCACCACTGCAAGGTTCTGGGTTACCAAAGTCTGCACTAGCATTTATTGATGCCATTAAAAAAAATAGATCTTGTCAGAAGCTCCTTCGAAGTAAGTTGATTCACATTGAGGCAAAACTTGAGGAGAACAAAGGGCTGAAAGACCGGTTCAAAATCTTGAAAGACTTTCAGGTTTCATGTAAAAGAAGAATAGGGCGTGCATTGTCCCAGAAGAAAGATCCACGTCTTCAGCTAATATCCGTGGAGAAACTGTGCACTTCAAAGGATTTGTCGAAGGTTAAGGACAAAAAGGTATCCACCATGCTTTATGGTCCCGCGGAGAATTCTCATGTTGCAAAGTATAGAATGGCTTTAACCATGTTTCCACTTTCACTTGAACGGAAAAAATGGTCAAAAGCTGAAAAAGAAAATCTTGGGAAGGGAATAAAACAACAATTTCAAGAAATGGCGCTTCAAATTTCAGTGGCTCAATTCAGGTATTATGGTACTGTGGAATCGTCTGGAGATTCAAATGATATTGATAATATTCTTGAGTCAATTAAAGATTTTGATTTCACTCCTGAAAAGATTAGGGAGTTTCTGCCAAAGGTTAATTGGGAAAGATTGGCTTCCATGTACGTTGCGGGTCGGTCTGGTGCAGAATGTCAAGCAAGGTGGTTGAATTATGAAGATCCATTGATCAATCATAACCCATGGACGGCAATAGAGGATAAGAATCTCTTGTTCATCATCCAAGAAAAAGGGATAAATAACTGGTTTGATATAGCAGTGTCACTGGGGACTAATAGGACTCCTTGTCAGTGCCTATCACGCTATCAGAGAAGTTTAAATGCTTCGGTACTCAAAAGAGAGTGGACCAAGGAGGATGACGATAAACTTTGTTCTGCTGTAGAAACAATTGGTGTGGGAGATTGGCAAGCTGTAGCTTCTGCCTTAGAAGGACGGACAGGTACCCAATGCTCAAATAGATGGAAAAAATCACTTGATCCCGCAAGAACTAGAAGAGGGTCATTCACACCTGTTGAAGACAAACGCCTGAAGATTGCAGTAATGCTTTTTGGGCCAAAAAATTGGAATAAGAAAGCTCAATCCTTGCCAGGTCGAAACCAAGTTCAATGTAGAGAAAGATGGTACAATTGTTTAGATCCTTCTCTGAAAAGAGGCAACTGGACTGACGAAGAGGATCGGATGCTTTCAGCAGCGATTAGAGAACATGGCTATAGTTGGGCCAAGGTGGCGACATGTGTGCCTTCACGTACTGATAATGAGTGTCGGAGGAGGTGGACAAAATTATTTCCAAATGAAGTTCCATTGCTCCAAGAAGCAAGAAGAATTCAAAAGGCCGCTTTTATTGGTAACTTTGTTGATCGAGAGTCAGAAAGATCTACCCTTCTCCTTATTGACTTTCAACCAACACCCATTACAAATCCAATCATTGCACCAGAGAATGACGATCCTTCTCAGAAAAGGAAGAGAAAGCGGAGGTCTGATTCATAG | 2040 | 42.75 | MSSISSDDEDENLSGEEAEGGFDEDIEALRRACLLTGADPDDCSYQSLSVGVGNACSGGLVPVCESDGDDDLELVRSIRERFSMSNEEDQHLSVKPINTIPPVTSDDEEDDFETLRAIQRRFAAYDKGRLLKECYNKLSSISGIECPNSEELCNTSHNPSNVDQNSSSAIWKLPNAYQSLTSPLQGSGLPKSALAFIDAIKKNRSCQKLLRSKLIHIEAKLEENKGLKDRFKILKDFQVSCKRRIGRALSQKKDPRLQLISVEKLCTSKDLSKVKDKKVSTMLYGPAENSHVAKYRMALTMFPLSLERKKWSKAEKENLGKGIKQQFQEMALQISVAQFRYYGTVESSGDSNDIDNILESIKDFDFTPEKIREFLPKVNWERLASMYVAGRSGAECQARWLNYEDPLINHNPWTAIEDKNLLFIIQEKGINNWFDIAVSLGTNRTPCQCLSRYQRSLNASVLKREWTKEDDDKLCSAVETIGVGDWQAVASALEGRTGTQCSNRWKKSLDPARTRRGSFTPVEDKRLKIAVMLFGPKNWNKKAQSLPGRNQVQCRERWYNCLDPSLKRGNWTDEEDRMLSAAIREHGYSWAKVATCVPSRTDNECRRRWTKLFPNEVPLLQEARRIQKAAFIGNFVDRESERSTLLLIDFQPTPITNPIIAPENDDPSQKRKRKRRSDS | 679 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 8145613 | 8155742 | - | Bda012335.2 | Bda15g00506 | 22201 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00506 | 679 | Gene3D | - | 514 | 566 | - | - | |
Bda15g00506 | 679 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 515 | 562 | IPR017930 | - | |
Bda15g00506 | 679 | SUPERFAMILY | Homeodomain-like | 386 | 454 | IPR009057 | - | |
Bda15g00506 | 679 | CDD | SANT | 518 | 560 | IPR001005 | - | |
Bda15g00506 | 679 | ProSiteProfiles | Myb-like domain profile. | 563 | 613 | IPR001005 | - | |
Bda15g00506 | 679 | MobiDBLite | consensus disorder prediction | 665 | 679 | - | - | |
Bda15g00506 | 679 | ProSiteProfiles | Myb-like domain profile. | 405 | 457 | IPR001005 | - | |
Bda15g00506 | 679 | Gene3D | - | 304 | 409 | - | - | |
Bda15g00506 | 679 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Bda15g00506 | 679 | CDD | SANT | 412 | 457 | IPR001005 | - | |
Bda15g00506 | 679 | SUPERFAMILY | Homeodomain-like | 513 | 609 | IPR009057 | - | |
Bda15g00506 | 679 | SUPERFAMILY | Homeodomain-like | 442 | 512 | IPR009057 | - | |
Bda15g00506 | 679 | Pfam | Myb-like DNA-binding domain | 463 | 507 | IPR001005 | - | |
Bda15g00506 | 679 | Pfam | Myb-like DNA-binding domain | 568 | 612 | IPR001005 | - | |
Bda15g00506 | 679 | Pfam | Myb-like DNA-binding domain | 516 | 562 | IPR001005 | - | |
Bda15g00506 | 679 | Pfam | Myb-like DNA-binding domain | 411 | 455 | IPR001005 | - | |
Bda15g00506 | 679 | ProSiteProfiles | Myb-like domain profile. | 458 | 509 | IPR001005 | - | |
Bda15g00506 | 679 | SMART | sant | 462 | 511 | IPR001005 | - | |
Bda15g00506 | 679 | SMART | sant | 515 | 564 | IPR001005 | - | |
Bda15g00506 | 679 | SMART | sant | 307 | 406 | IPR001005 | - | |
Bda15g00506 | 679 | SMART | sant | 409 | 459 | IPR001005 | - | |
Bda15g00506 | 679 | SMART | sant | 567 | 615 | IPR001005 | - | |
Bda15g00506 | 679 | MobiDBLite | consensus disorder prediction | 9 | 23 | - | - | |
Bda15g00506 | 679 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 458 | 513 | IPR017930 | - | |
Bda15g00506 | 679 | Gene3D | - | 410 | 457 | - | - | |
Bda15g00506 | 679 | MobiDBLite | consensus disorder prediction | 656 | 679 | - | - | |
Bda15g00506 | 679 | CDD | SANT | 570 | 613 | IPR001005 | - | |
Bda15g00506 | 679 | Gene3D | - | 567 | 616 | - | - | |
Bda15g00506 | 679 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 563 | 617 | IPR017930 | - | |
Bda15g00506 | 679 | PANTHER | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 | 18 | 676 | - | - | |
Bda15g00506 | 679 | CDD | SANT | 465 | 509 | IPR001005 | - | |
Bda15g00506 | 679 | Gene3D | - | 462 | 512 | - | - | |
Bda15g00506 | 679 | ProSiteProfiles | Myb-like domain profile. | 511 | 562 | IPR001005 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda15g00506 | Bda-Chr15:8145613 | Bda03g01467 | Bda-Chr3:52603883 | 3.40E-13 | dispersed | |
Bda15g00506 | Bda-Chr15:8145613 | Bda05g00965 | Bda-Chr5:58137792 | 1.57E-12 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17172 | PF00249 | Myb_DNA-binding | 2.70E-10 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00506 | K09422 | - | qsu:112030773 | 789.26 |