Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00530 ATGAAAGCGGTAGACTACCCAGGATCTGATATCCCCAAACGTTACATTTTAGCAGAGAATGCAACTCCAAATAAAACGAGGGATTCTGCAGCCGCTCCCCAGTCAAGCGCTGCAGCTCCATCTCCAACAGCAGTACCACACGAGCATAAAAAGCGGAATCGAAAGCTAATTGGCTCATTACTTGGATTTTGTGCTGGAGCATTAGCCGGAACCGTATCTGGGTTTATATTCACTGTGTTATTTAAGCACATTCTGCGCGCCATTAGAGGTGGAGGAAAGAAACGGGGCCCGGCAATATTCAGTTCAGGAATCAAAGCAGAAGACTTGGCTTTTTTGGAGAAAGACGACGGGTTGGCAGCATTGGTATCGATTGGCAAAGGTGGCTGTGGAGAAGTTTACAAAGCTGAATTACCTGGAAGCAATGGGAAAATAATTGCCATAAAGAAGATTATTCAACCAAAGGAAGCACAAGAAGCCATTGATGAAGAAAGTAAGTTAATAATGAACAAGAAAATGCGTCAAATAAAGTCTGAAATAAATACCGTGGGACAAATTCGGCATCGAAATCTTCTTTCTCTACTGGCTCATGTCTCACGTCCTGATTGCCATTACCTTGTCTATGAATTCATGAAAAATGGTAGCTTACACGATATTCTGAATGAGGTATCAGAAGGAAGAAGAGAGCTAGATTGGCTTGATAGGCACCGAATTGCCCTTGGAGTGGCAGCCGGGCTCGAATATCTTCACACCAACCAGAATCCGCGCATAATTCATAGAGATCTCAAGCCAGGAAATATCTTACTAGACGATGACATGGAAGCTCGAATAGCAGATTTTGGGCTTGCAAAAATAATACCTGATGCGCTTACTCATATCACAACCTCCAATGTAGCTGGAACCGTTGGTTACATAGCACCCGAATATCATCAGACTCTGAAGTTCACTGACAAATGTGACATCTACAGCTTTGGGGTGGTGCTCGCAGTCTTGGTTATGGGGAAGCTTCCATCTGATGAGTTTTTCAGAAACACAGATGAGATAAGTTTGGTCAAGTGGATGAGAAAGGTGATGACTTCAGAGAATCCTCGGATAGCCATTGATCCAAAGCTAATGGGAAATGGAAGGGAGGAACAAATGCTCTTGGTCCTGAAGATTGCTTGCTTCTGCACTCTAGATGATCCTAAAGAAAGACCAAACAGCAAAGATGTTAGATGCATGTTATCTCAGATCCACCACTAA 1239 43.34 MKAVDYPGSDIPKRYILAENATPNKTRDSAAAPQSSAAAPSPTAVPHEHKKRNRKLIGSLLGFCAGALAGTVSGFIFTVLFKHILRAIRGGGKKRGPAIFSSGIKAEDLAFLEKDDGLAALVSIGKGGCGEVYKAELPGSNGKIIAIKKIIQPKEAQEAIDEESKLIMNKKMRQIKSEINTVGQIRHRNLLSLLAHVSRPDCHYLVYEFMKNGSLHDILNEVSEGRRELDWLDRHRIALGVAAGLEYLHTNQNPRIIHRDLKPGNILLDDDMEARIADFGLAKIIPDALTHITTSNVAGTVGYIAPEYHQTLKFTDKCDIYSFGVVLAVLVMGKLPSDEFFRNTDEISLVKWMRKVMTSENPRIAIDPKLMGNGREEQMLLVLKIACFCTLDDPKERPNSKDVRCMLSQIHH 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8338555 8339793 - Bda012360.1 Bda15g00530 22225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00530 412 PANTHER OS01G0253100 PROTEIN 9 410 IPR045271 GO:0004714|GO:0006468
Bda15g00530 412 PANTHER OS06G0288100 PROTEIN 9 410 - -
Bda15g00530 412 ProSiteProfiles Protein kinase domain profile. 118 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00530 412 SUPERFAMILY Protein kinase-like (PK-like) 123 407 IPR011009 -
Bda15g00530 412 MobiDBLite consensus disorder prediction 22 50 - -
Bda15g00530 412 Gene3D Phosphorylase Kinase; domain 1 124 210 - -
Bda15g00530 412 Gene3D Transferase(Phosphotransferase) domain 1 211 411 - -
Bda15g00530 412 Pfam Protein kinase domain 122 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00530 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Bda15g00530 412 SMART serkin_6 118 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00530 412 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00530 Bda-Chr15:8338555 Bda12g00350 Bda-Chr12:4028559 4.25E-65 dispersed
Bda15g00530 Bda-Chr15:8338555 Bda14g01625 Bda-Chr14:41485244 9.31E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70102 PF00069 Pkinase 1.60E-44 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00530 - - pop:7453813 607.831