Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00532 ATGATGATCGACGACATAGCTGCTTCGTCTTCGAGCTCGGGTGTCAACATAAGTGAATTGACACTCTCTTTAGCAAACAACATAGTCTGTAGAGTTGCTTTTGGGAGAAGAAGAGAAGGAGGAGGAGTTAATGGGGAGAAGAGTAGATTTCATGAGCTTCTTCAAGAAACGCAGAATTTATTAGGAGGCTTCTGCATTTCTGATTTCTTCCCATGGCTGCACTGGGTGAACAGGTTTAATGGCGTAAAAGCTAGTCTTGACAAGTGTTTTCGAGAGTTGGATAGCTTTTATGACAGAGTTATTGAAGAACACAGAGACGATCGTCGCCATAGATCGGAGATTGAGGATATTGTCGATGCTTTGCTTCGTGTTCAGAAGGATCCTGATCAACCCATCTGTCTCACCAATGAACAAATCAAGGCTGTTCTGACAGATATTTTCATTGCAGGAACAGATACATCACCAGCAACCCTAACATGGATAATGGCGGAGCTGATGAGGAACCCATCAGTAATGGAAAAGGCACAGAGAGAGGTTAGAGAAGCCGTGAAAGGGAAAGAGAAGGTCGAAGAAGAAGACATCTCCAATCTAACTTACCTAAAACTAGTGATAAAGGAGGGACTCAGACTACACCCACCGGCTCCATTGTTACTACCCCGACAAACATTAGAAAACAGCAGAATTCAAACAGCAGAATTCAATCATACGATATTCCGGACCCGGGTATTCTTCGATGCAAAATCGATAGCATCGGACCCGAAGTATTGGGAAAATCCGAATGAGTTTAAGCCGGAGAGATTTTCTGGCAGCTCTGTGGATTACAAGGGACAACACTATGAGTTTCTTCCGTTTGGGACGGGGAGGAGGAGCTGTCCTGGTCTGAACTTTGCGGTTCAAGTAATTGAGATTGCCTTGGCAAACCTTGTGCTGTGCTTTGATTGGGAGTTGGTTGATGGAGAAGAGTTGGACATGGACGAAGCTTCTGGGATTGCAGTGCACAAGAGAGTTCCTCTCCGCCTCTCTGCCAAGAGACCGATTTATAATTCTTAA 1050 44.67 MMIDDIAASSSSSGVNISELTLSLANNIVCRVAFGRRREGGGVNGEKSRFHELLQETQNLLGGFCISDFFPWLHWVNRFNGVKASLDKCFRELDSFYDRVIEEHRDDRRHRSEIEDIVDALLRVQKDPDQPICLTNEQIKAVLTDIFIAGTDTSPATLTWIMAELMRNPSVMEKAQREVREAVKGKEKVEEEDISNLTYLKLVIKEGLRLHPPAPLLLPRQTLENSRIQTAEFNHTIFRTRVFFDAKSIASDPKYWENPNEFKPERFSGSSVDYKGQHYEFLPFGTGRRSCPGLNFAVQVIEIALANLVLCFDWELVDGEELDMDEASGIAVHKRVPLRLSAKRPIYNS 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8354957 8356407 - Bda012363.1 Bda15g00532 22227

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00532 349 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 284 293 IPR017972 GO:0005506|GO:0016705
Bda15g00532 349 PRINTS E-class P450 group I signature 291 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 PRINTS E-class P450 group I signature 245 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 PRINTS E-class P450 group I signature 281 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 PRINTS E-class P450 group I signature 138 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 PRINTS E-class P450 group I signature 24 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 PRINTS E-class P450 group I signature 158 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 PANTHER OS08G0105600 PROTEIN 2 344 - -
Bda15g00532 349 Gene3D Cytochrome P450 1 346 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 Coils Coil 172 192 - -
Bda15g00532 349 Pfam Cytochrome P450 2 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 PANTHER CYTOCHROME P450 71A9 2 344 - -
Bda15g00532 349 PRINTS P450 superfamily signature 291 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 PRINTS P450 superfamily signature 202 213 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 PRINTS P450 superfamily signature 282 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 PRINTS P450 superfamily signature 149 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda15g00532 349 SUPERFAMILY Cytochrome P450 3 343 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00532 K20617 CYP71A; cytochrome P450 family 71 subfamily A - jre:109000776 394.815
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda06g00623 Bda15g00532 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00532 Bda-Chr15:8354957 Bda13g00594 Bda-Chr13:6948705 2.41E-88 dispersed
Bda15g00532 Bda-Chr15:8354957 Bda15g00535 Bda-Chr15:8414481 8.43E-95 proximal
Bda15g00532 Bda-Chr15:8354957 Bda06g00623 Bda-Chr6:8528232 1.63E-126 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g861 . . Bda06g00623 Bda15g00532 . . . Bma12g01061 . Cmo18g00175 . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0183 . Lsi02g00436 Csa01g00909 Chy12g01217 Cme12g01643 Blo13g00154 Blo15g00245 . . . . . . . . . . . . . . . Bhi08g01683 . . . Hepe07g2179 . . Cla03g00302 . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000114 2 12 3 1 0 7 0 7 6 6 11 9 15 7 3 22 9 4 0 10 11 2 0 8 13 10 6 17 8 7 216
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda15g00532 Bda_Chr15 FPKM 1.428083 1.426343 0.100127 0.127985 4.531881 4.194183 4.722481 0.0 0.046895