Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00546 | ATGTGTAGGAAAAGATTGTTGAATCTAAAAGCATTGAATTTTCTTACACAATTGGTGTTTGAGAGGAAGATGTTGTGCAGCAAAAAATCTCAGGAAATGGCTTCATCAAGCTCATACAATTCACCATGTGCGGCCTGCAAGTTCTTGAGGAGAAAGTGTATGCCCGGCTGCATATTTGCGCCGTATTTCCCACCCGAGGAGCCTCAGAAGTTCGCCAACGTCCACAAGATATTCGGAGCCAGCAATGTTACCAAGCTCCTCAACGAACTCCTCCCCCACCAACGCGAAGACGCCGTGAATTCCCTTGCCTACGAGGCCGAGGCTCGAGTCCGAGACCCCGTCTACGGCTGCGTCGGAGCCATCTCCTTCCTCCAACGCCAAGTCCAACGGCTTCAGAAAGAGCTCGATGCCGCCAATGCCGACCTCATCCGCTACGCTTGCTCTGAGATCCCTTCCTCCATCTCCGCACCGTCCGGGGTAAGCGTGTTTGGCCGGAGAGGCGGAAACAGAGGAGGAGGTGGCGGAGGAGGAGGGTATCATCAGCCTCCTCCTTTCCCTATGCCCTATCCCATACCTTGGAATGATGATGAGGACATCCATGGAGGAGGAGGAGCAGATCCAGGGAGTATGTGA | 633 | 53.55 | MCRKRLLNLKALNFLTQLVFERKMLCSKKSQEMASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACSEIPSSISAPSGVSVFGRRGGNRGGGGGGGGYHQPPPFPMPYPIPWNDDEDIHGGGGADPGSM | 210 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 8519291 | 8519923 | + | Bda012379.1 | Bda15g00546 | 22241 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00546 | 210 | Pfam | Lateral organ boundaries (LOB) domain | 42 | 139 | IPR004883 | - | |
Bda15g00546 | 210 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 33 | 206 | - | - | |
Bda15g00546 | 210 | Coils | Coil | 121 | 148 | - | - | |
Bda15g00546 | 210 | MobiDBLite | consensus disorder prediction | 164 | 210 | - | - | |
Bda15g00546 | 210 | ProSiteProfiles | LOB domain profile. | 41 | 142 | IPR004883 | - | |
Bda15g00546 | 210 | PANTHER | ELONGATED PETIOLULE 1 | 33 | 206 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda11g01663 | Bda15g00546 | CCT | |
Bda11g01663 | Bda15g00546 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01663 | Bda-Chr11:50732063 | Bda15g00546 | Bda-Chr15:8519291 | 1.42E-78 | dispersed | |
Bda13g01832 | Bda-Chr13:42352205 | Bda15g00546 | Bda-Chr15:8519291 | 9.24E-58 | dispersed | |
Bda14g01169 | Bda-Chr14:11021002 | Bda15g00546 | Bda-Chr15:8519291 | 7.27E-74 | dispersed | |
Bda14g01228 | Bda-Chr14:12457879 | Bda15g00546 | Bda-Chr15:8519291 | 7.41E-46 | dispersed | |
Bda15g00282 | Bda-Chr15:5610058 | Bda15g00546 | Bda-Chr15:8519291 | 1.52E-48 | dispersed | |
Bda15g00546 | Bda-Chr15:8519291 | Bda01g01103 | Bda-Chr1:45777636 | 8.00E-53 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17176 | PF03195 | LOB | 3.90E-42 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00546 | - | - | tcc:18604002 | 274.633 |