Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00555 ATGCAGAGCGCGGCTTTCAATTTCTCGCCTTCATTGCCTCTGCTGAAGCCTCGAAGGTCTTCGAATCCTATCTCGGCCTCTGGTTTCAACATCGTATGCTCCTCTCCCGCTTCTTCTAGCTGCAACGATCTTAGCTCCTCTGCTGGTGTATCTCTTTCTTCTTCTGCTATTCCGCTCCGATCCTGGCCTTTGTCCTCGTCTTCTTCCTTCTCTCCTAAATTTAGGCCTTGGTCTGGTGCTCCGTCACTGCGTGATGACTCTGTCTCGAGTCGTTTTGAGGCCAGGGCGACCTCGGTGCAGGAGAGTGCTGGAGAGAGCGAGGAATCCAAGAGTTTGTTCAAGACGCTGGAGTTGGGAGCGTTGTTCGGACTCTGGTATCTCTTCAACATATACTTCAATATCTACAATAAGCAGGTACTGAAGGTGTATCCATTCCCCGTTACAGTCACTACAATTCAATTTGCTGTTGGATCTGTGCTTGTTCTTTTTATGTGGAGTTTTAATCTCTATAAGAAGCCTAGAGTTAGTGGCGCACAGCTTGCAGCTTTACTGCCACTGGCAGTTGTTCACACGTTAGGAAACCTTTTCACCAACATGAGTCTCGGTAAAGTGGCTGTATCATTCACTCACACAATCAAAGCTATGGAGCCTTTCTTCTCTGTCATCCTATCTGCAATGTTTCTCGGGGAGAGGCCTACACTATGGGTGGTTGTTTCTCTTTTACCAATTGTTGGTGGTGTGGGATTGGCGTCGGCCACAGAGGCTTCATTCAACTGGTCTGGATTTTGGAGTGCTATGGCTTCCAATTTGACCAATCAATCCCGAAATGTCCTTAGCAAAAAGTTCATGATAAGAAAAGAGGATTCCTTGGACAACATCACTCTCTTTTCGATAATTACAATCATGTCCTTCATTTTGTTAGCTCCCGTTACTCTCTTCATGGAAGGTGTTAAGTTCACTCCCGCTTATCTGCAGTCTACAGGATTGAACGTTAGTCAATTAGCCACTAGGTCTCTTCTTGCAGCCTTGTGTTTCCATGCTTATCAACAGGTGTCTTATATGATATTGCAAAGGGTATCTCCTGTCACTCATTCTGTCGGAAATTGTGTAAAGCGGGTGGTTGTCATTGTGAGCTCAGTCATCTTCTTCCAAACACCCTGTCTCCCCGATCAATTCTCTTGGCACTGGAGTGGCCCTTGCTGGAGTTTTCCTTTATTCAAGGGTGAAACGCATTAA 1236 46.12 MQSAAFNFSPSLPLLKPRRSSNPISASGFNIVCSSPASSSCNDLSSSAGVSLSSSAIPLRSWPLSSSSSFSPKFRPWSGAPSLRDDSVSSRFEARATSVQESAGESEESKSLFKTLELGALFGLWYLFNIYFNIYNKQVLKVYPFPVTVTTIQFAVGSVLVLFMWSFNLYKKPRVSGAQLAALLPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGERPTLWVVVSLLPIVGGVGLASATEASFNWSGFWSAMASNLTNQSRNVLSKKFMIRKEDSLDNITLFSIITIMSFILLAPVTLFMEGVKFTPAYLQSTGLNVSQLATRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPCLPDQFSWHWSGPCWSFPLFKGETH 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8675523 8678558 + Bda012392.1 Bda15g00555 22250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00555 411 MobiDBLite consensus disorder prediction 61 85 - -
Bda15g00555 411 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 50 386 - -
Bda15g00555 411 PANTHER SOLUTE CARRIER FAMILY 35 50 386 - -
Bda15g00555 411 MobiDBLite consensus disorder prediction 61 75 - -
Bda15g00555 411 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 116 387 IPR004696 GO:0016021|GO:0022857|GO:0055085
Bda15g00555 411 Pfam Triose-phosphate Transporter family 117 387 IPR004853 -
Bda15g00555 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 161 251 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g01656 Bda15g00555 CCT
Bda11g01656 Bda15g00555 ECH
Bda06g00602 Bda15g00555 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01656 Bda-Chr11:50639562 Bda15g00555 Bda-Chr15:8675523 0 dispersed
Bda14g01165 Bda-Chr14:10982055 Bda15g00555 Bda-Chr15:8675523 6.83E-132 dispersed
Bda15g00555 Bda-Chr15:8675523 Bda03g00535 Bda-Chr3:4454991 2.30E-14 dispersed
Bda15g00555 Bda-Chr15:8675523 Bda06g00602 Bda-Chr6:8222811 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00555 K15283 - csv:101203848 529.25