Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00578 | ATGGAGGCTTCTTCTAGGTCTGAAGACGTTGTCGTCAAAGAAGAAAGTAAGAAAGACAGATCCAGTGATGGGGATGAACTTTTCGAACGAGAAGTTCTTGTCAAGATTGGAAATGGAAAAATGAGCCATGATGGTAATGATAAGAACTCACACTCAAACAATCAGGTCCCCTTCGTGACAAAAATGGAAAAATCTTCTGTGGAATTTGACTCCATGACATCTTCTTCGAGTCGAAATGATCAGGATGAAGAGCTTGAATCAGCAAGAGTAGAAATGGGAGAGGTGAGAGAAGAAAACCAACGCCTAAAAATGTGCTTAGATCAGATGATGAAGAATTACAAGATGCTACAAATGCAGTTTGATGACATTGTTGGAAAAGATGGAAAGAAAAACAAGATGCCACCGGTAGAAGAAACCGACCTAGTTGCCCTTACGCTCGGAAGATTTCCAAGCGCGGGAAAAACGATCAGTGAAAACATCATGAATTCTCACGAACTGATCAAAGAAAATGATCAACAAATCATGACACAAGAATTAGCTCTAGGGTTAGACTGCAACTTCGATGGCTCTAGATTGAGTGATCGAATAAAGGCTCATTCGCCGAAAGGTCGAACCCCGAGTTCGAAAAGCAACGAAGAAGGAGAAGGGGAAGATCCACGGCCACCCAACAAAGGTTTGAAGACAATGAGAAGTGGAGAAGATGAAGTGATGCAGCAGAATCCACCGAAGAAAGCTAGGGTTTGTGTGAGGGCTCGTTGTGATACGCCAACGATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAGATAGCAAAAGGAAACCCATGCCCAAGAGCTTATTATCGTTGTACTGGAGCTCAATCATGTCCAGTCAGAAAACAGGTGCAAAGATGTGCAGAGGACATGTCGATTTTAATCACTACATACGAAGGAACCCACAACCACCCTCTCTCCGTCTCTGCCACAGCCATGGCATCCACCACTTCCGCAGCGGCGGCAATGCTATTATCCGGCTCATCAACCTCACAATTCAGTCCTAACCCATCAGCAACAACAGCCACCACCACTCAGGCAAATCTCCACGGATTAAACTTCTATCTTTCTGACAATTCAAATTCAAAACAATTTTATTTACCCAATTCTTCCATGTCATCTTCCTCGCCCACACACCCAACAATCACCATAGACCTCACTTCAAATCCGTCTTCTTCTTCTTCGTCTTATGCTTCTTCTTCTTCCCATTTTGGCAGACCTTTTTCTTCATCGTATCCTCCTAGGTATCCTTTCACAAACCTGGATTTCGGTTCTTCTCAGTCCAACCTTATGTCTTGGGGCAATGGCCTTCTTGGCTATGGAAATCAACTGCCTTATAACACAACCCAAATGGGAACTTCTGATATCGGAACTTATATGCAGAAGACAAATAACGTGCCAGTTGTAGCGGCGCCCCCACGACACCCTCTTCCGGACCCAATCGCCGCCGCAACGAAGGTAATTACAGCGGACCCTAGTTTCCAATCTGCTTTAGCGGCGGCATTAACATCATTCATCGGAAATGGAGCTAGCGGCAGTGTCGCCGGTGAAAATTTTCTGGAAAATTTGAAGTGGGTGGAGAAGTTTCCACTGGCGTCGTCTACCCAAAAAGGAAATGGGTGCGGATCGAGCTTCATCAGCACCACGCCGGCGACGAATTCTCAGCATGGGAACTTGACGTTCTTACCTTCAAATTCATCGCCATTTTCGACATCCAAAAGTGCTTCTACATCTCTGGGAGATAACAGAGATCACCAACCTAGTTGA | 1803 | 44.98 | MEASSRSEDVVVKEESKKDRSSDGDELFEREVLVKIGNGKMSHDGNDKNSHSNNQVPFVTKMEKSSVEFDSMTSSSSRNDQDEELESARVEMGEVREENQRLKMCLDQMMKNYKMLQMQFDDIVGKDGKKNKMPPVEETDLVALTLGRFPSAGKTISENIMNSHELIKENDQQIMTQELALGLDCNFDGSRLSDRIKAHSPKGRTPSSKSNEEGEGEDPRPPNKGLKTMRSGEDEVMQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAQSCPVRKQVQRCAEDMSILITTYEGTHNHPLSVSATAMASTTSAAAAMLLSGSSTSQFSPNPSATTATTTQANLHGLNFYLSDNSNSKQFYLPNSSMSSSSPTHPTITIDLTSNPSSSSSSYASSSSHFGRPFSSSYPPRYPFTNLDFGSSQSNLMSWGNGLLGYGNQLPYNTTQMGTSDIGTYMQKTNNVPVVAAPPRHPLPDPIAAATKVITADPSFQSALAAALTSFIGNGASGSVAGENFLENLKWVEKFPLASSTQKGNGCGSSFISTTPATNSQHGNLTFLPSNSSPFSTSKSASTSLGDNRDHQPS | 600 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9002564 | 9005686 | + | Bda012421.1 | Bda15g00578 | 22273 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00578 | 600 | SMART | WRKY_cls | 258 | 318 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00578 | 600 | MobiDBLite | consensus disorder prediction | 380 | 402 | - | - | |
Bda15g00578 | 600 | MobiDBLite | consensus disorder prediction | 48 | 76 | - | - | |
Bda15g00578 | 600 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Bda15g00578 | 600 | Pfam | WRKY DNA -binding domain | 259 | 317 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00578 | 600 | MobiDBLite | consensus disorder prediction | 1 | 88 | - | - | |
Bda15g00578 | 600 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 53 | 595 | IPR044810 | GO:0003700 | |
Bda15g00578 | 600 | ProSiteProfiles | WRKY domain profile. | 253 | 319 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00578 | 600 | PANTHER | WRKY TRANSCRIPTION FACTOR 61-RELATED | 53 | 595 | - | - | |
Bda15g00578 | 600 | SUPERFAMILY | WRKY DNA-binding domain | 251 | 318 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00578 | 600 | Coils | Coil | 78 | 98 | - | - | |
Bda15g00578 | 600 | MobiDBLite | consensus disorder prediction | 194 | 231 | - | - | |
Bda15g00578 | 600 | MobiDBLite | consensus disorder prediction | 568 | 600 | - | - | |
Bda15g00578 | 600 | Gene3D | WRKY domain | 243 | 319 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00578 | 600 | MobiDBLite | consensus disorder prediction | 194 | 243 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda14g00841 | Bda15g00578 | CCT | |
Bda11g01690 | Bda15g00578 | CCT | |
Bda14g00841 | Bda15g00578 | ECH | |
Bda11g01690 | Bda15g00578 | ECH | |
Bda06g00552 | Bda15g00578 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01690 | Bda-Chr11:51041601 | Bda15g00578 | Bda-Chr15:9002564 | 1.52E-87 | dispersed | |
Bda14g00841 | Bda-Chr14:6479186 | Bda15g00578 | Bda-Chr15:9002564 | 6.67E-91 | dispersed | |
Bda15g00578 | Bda-Chr15:9002564 | Bda15g00959 | Bda-Chr15:17679033 | 1.88E-56 | dispersed | |
Bda15g00578 | Bda-Chr15:9002564 | Bda15g00595 | Bda-Chr15:9149910 | 0 | wgd | |
Bda15g00578 | Bda-Chr15:9002564 | Bda06g00552 | Bda-Chr6:7798195 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17182 | PF03106 | WRKY | 1.10E-23 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00578 | - | - | tcc:18604620 | 543.117 |