Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00581 ATGCCTGGAAGTATTATTGAGATTGAGCTTTACAACTTTATGACCTTCAATCACTTAAAATGCAAACCGGGATCACGATTGAACCTTGTTATTGGTCCAAATGGATCTGGAAAAAGCTCAATCGTTTGTGCCATTGCACTTGGTCTTGGTGGCGAGCCTCAGCTTCTTGGGAGAGCCACAAATATTGGTGCATTTGTGAAACGTGGAGAGGAGTCTGGCTATATAAAAATTACCTTGAGAGGCGAGACTAAAGAAGAGCAGATTTCCATCATGCGGAGAATGGACTTTTTGCCACAGGACAAGGTTTGTGAGTTTGCAAAACTAACTCCTGTGCAACTTCTAGAAGAGACTGAAAAAGCTATTGGCGATACTCAACTTCCAGGCCAACATCGTGCGCTTGTTGAAAAAAGCCGTGAAATAAAGAATATAGAGCGGGCTGTGGAAAAAAATGGAGACACATTGAATCAGTTGAAGGCACTAAATGCTGAGCTAGAGAAGGATGTTGAGCGTGTTCGTCAAAGGGAAATACTTCTAGCAAAGGCTGAGTCCATGAAAAAGAAATTGCCGTGGCTTAAGTATGATATAAAGAAGGTTGAATATATAGAATTGAAGGAGAAGGAGAATGATGCCAAAAAGAAGTTGGATGAAGCAGCAACGACATTAAATGGTCTCAAGGAACCCATTGAGAAACATAAAAAGGAGAAAGCAGTGGTGGATGGTAAAAGCAAAAAAATTAGCAATATCATGAATAATAATACGAAGAAACGAATCGAGCTTCTAGATAATGAAAACCATTTGGGGGTAGAAGTACAAGGCAAGTACAAAGAAATGGGAGATTTGAGGAAGCAAGAAGAGTCTCGGCAACAAAGAATTATACAAGCTAAGGAGGAACTTGTTGCAGCTGAACTAGAGCTTCAAAATTTGCGTCCCTATTGTGTTCCACGGGAGGATATTGAAAGATTAGCTAGTCAAATAATGGATCTTGAACTTTCTGCAAATCAAAAGAGGTTGTCTAAGACAGAGAGCGAAAAAGTCTTAGCTCAAAAAAGGATAGCCTTGAGACAGTGCTTAGACAGGTTAAAGGATATGGAAAGCAAACATACTAAACTTTTGCAGGCATTGGAAAATTCTGGAGCTGATAAGATTTCTGATGCTTTCCGCTGGTTGCGAGAACATCGCCATGATTTCAACAAGGAGGTTTATGGTCCAATTTTGCTTGAGGTTAATGTTTCTAATCAGATTCATGCTGACTACTTGGAAAGTCAAACCCCTTATTACATCTGGAAGTCATTGGTCAGTAATCTCCGCCTACAACTAATATTTAACCTTTTATTTCTTTTGATTTTTGACTTGCAGTCTTTTGTAACTCAAGATTCTAATGATCGTGACCTTTTGGTAAAATGTTTCAAATCATTTGATGTTCCCATTTTGAATTACGTGGATGATGAGGGTCGTCGAAAAGAAAAATTTGAAATTACTGAGGAGATGCGAAAACTTGGCATCTATTCTAGGCTTGACCAAGTTTTTGATGCTCCCAACTCTGTGAAGGAAGTTTTGATCAGTCAGTTTGCTTTGGATCGCTCATATATTGGTTCTAAGGAGACTGATCAGAAGGCAGATGCAGTTTCAAAATATGGAATTTTAGATTTTTGGACTCCAGAAAATCACTATCACTGGTCTGTATCCAGATACGGTGACCATATGACTGGAAATGTGGAACCAGTGGAGCGGTCCCGTCTTCTTCTGTGCAATAAGGATGTGGGTGAAATTGATGGTCTGAGATCGAGGAAAAGTGAACTGGAAGAATCTGTAGCAGCTTTAGAAGAAAGCCACAAGTCCTTTCAGATTGAGATAAGAAACATAGAAAATGAAACAGCTAAACTTCGTAAACAAAGGGAGGACATTATCAGCATTGTGCACCAGGAGAAGAGGAAGCGTCAGGAAATGGAAAATCGTATCAATCAAAGGAAAAAGAAACTAGAATCCATGTCACAAGAGGAAGACTTGGAGACTTTCATAGCGAAGCTTAATGATCAAGCTGCAGGTATATCTATTCAACGGTTCCGCTGTGCAATAGAGATTAAGAATCTACTTGTAGATACTATATCCCACCGACGAAGTTTTGCTCAACATCATTTGTCATCAATTGAATTTGATGCTAAGATTAGAGACATGGAATTCAATATGAAGAAACAGGAGAAGGATGCTATGCAAGCATCATTGCACTTAGAGAATTGTAAGAAGGAAGTAGAGGATTGTAGACAGCAACTGTCAGTTGCTAAGAGGCATGCGGAATCAATTGCTGTGATCACTCCTGAACTTAAAAAGGATTTTCTTGAGGTTTGTTAG 2349 39.29 MPGSIIEIELYNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATNIGAFVKRGEESGYIKITLRGETKEEQISIMRRMDFLPQDKVCEFAKLTPVQLLEETEKAIGDTQLPGQHRALVEKSREIKNIERAVEKNGDTLNQLKALNAELEKDVERVRQREILLAKAESMKKKLPWLKYDIKKVEYIELKEKENDAKKKLDEAATTLNGLKEPIEKHKKEKAVVDGKSKKISNIMNNNTKKRIELLDNENHLGVEVQGKYKEMGDLRKQEESRQQRIIQAKEELVAAELELQNLRPYCVPREDIERLASQIMDLELSANQKRLSKTESEKVLAQKRIALRQCLDRLKDMESKHTKLLQALENSGADKISDAFRWLREHRHDFNKEVYGPILLEVNVSNQIHADYLESQTPYYIWKSLVSNLRLQLIFNLLFLLIFDLQSFVTQDSNDRDLLVKCFKSFDVPILNYVDDEGRRKEKFEITEEMRKLGIYSRLDQVFDAPNSVKEVLISQFALDRSYIGSKETDQKADAVSKYGILDFWTPENHYHWSVSRYGDHMTGNVEPVERSRLLLCNKDVGEIDGLRSRKSELEESVAALEESHKSFQIEIRNIENETAKLRKQREDIISIVHQEKRKRQEMENRINQRKKKLESMSQEEDLETFIAKLNDQAAGISIQRFRCAIEIKNLLVDTISHRRSFAQHHLSSIEFDAKIRDMEFNMKKQEKDAMQASLHLENCKKEVEDCRQQLSVAKRHAESIAVITPELKKDFLEVC 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9023381 9036115 - Bda012424.1 Bda15g00581 22276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00581 782 Coils Coil 590 631 - -
Bda15g00581 782 Coils Coil 200 220 - -
Bda15g00581 782 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 450 780 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Bda15g00581 782 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 95 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Bda15g00581 782 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 95 432 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Bda15g00581 782 Coils Coil 729 763 - -
Bda15g00581 782 Coils Coil 639 666 - -
Bda15g00581 782 Pfam AAA domain 8 282 IPR038729 GO:0140664
Bda15g00581 782 Gene3D - 4 250 IPR027417 -
Bda15g00581 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 255 IPR027417 -
Bda15g00581 782 Coils Coil 346 377 - -
Bda15g00581 782 Coils Coil 143 174 - -
Bda15g00581 782 CDD ABC_SMC5_euk 3 114 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00581 K22803 - vvi:100249983 1046.19