Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00586 ATGACTCTTAAAGGCGGCACAAGCCAAGCTTGCGCCGCATGCAAATACCAGAGGAGAAAGTGCAACGCCGAGTGCCCACTGGCGCCGTATTTCCCCCCCGACCAGCCGAAGCTGTTTCAAAATGCGCATAAGCTGTTCGGCGTAAGAAACGTCCTGAGAATTCTCAAACATTTGGATCAAGACCAAAAGCCCGAGGCCATGCGCTCAATTATCTACGAATCTAACATGCGGGATCGGTTTCCGGTGAACGGATGTTGGGAGGTGATCTGCTATCTCCGGTGGCAATTACAGGCAACCGAGGAGGAGCTCAATCTTGTCTTATCACAGCTCGAGCTGTGCAGACAGCATCAGCTTGAAGATGTCACTTCTCAGTTAGAGCTAGGAATGGGTCCACCCTCAAATGCTATTCCACTTTATAATCAATCTTCTATGACGTCCTTTTCTGCAACACAAAATGAAGCCATTTACAACCCTATTTGCTTTGATTTTAAAGATAACTTGGCAAATCCTTTGTGGGTTCAGCACCCTTTTGGAGATAATAATAGTATTTACGTTAATAGTATGGAAAATCACCCTCTTCCCATCCAAGAACAAGTTCAAAACTGTGACGATATGCAGCCTTTTTTTGACACCATGGACGATAGACACTCGTATATTGATACAAAAGAGGCTTACGAGTGTAGGTCAGTTCAGATTTTGTTGAATATTATTATAATTTTGTTAGAGTTTTTTTTTTTAAATATAATCTTTTTATTTGAATCTAAAACTGCAGTTCAGAAGAGTCTCTTAAAGATCCAACGTTGTTAA 807 42.01 MTLKGGTSQACAACKYQRRKCNAECPLAPYFPPDQPKLFQNAHKLFGVRNVLRILKHLDQDQKPEAMRSIIYESNMRDRFPVNGCWEVICYLRWQLQATEEELNLVLSQLELCRQHQLEDVTSQLELGMGPPSNAIPLYNQSSMTSFSATQNEAIYNPICFDFKDNLANPLWVQHPFGDNNSIYVNSMENHPLPIQEQVQNCDDMQPFFDTMDDRHSYIDTKEAYECRSVQILLNIIIILLEFFFLNIIFLFESKTAVQKSLLKIQRC 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9068803 9069609 - Bda012429.1 Bda15g00586 22281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00586 268 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Bda15g00586 268 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 172 - -
Bda15g00586 268 Pfam Lateral organ boundaries (LOB) domain 10 105 IPR004883 -
Bda15g00586 268 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 7 172 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00557 Bda15g00586 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00586 Bda-Chr15:9068803 Bda14g00187 Bda-Chr14:1337488 1.19E-28 dispersed
Bda15g00586 Bda-Chr15:9068803 Bda06g00557 Bda-Chr6:7837306 2.16E-120 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17184 PF03195 LOB 9.50E-36 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00586 - - nnu:104596493 275.789