Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00591 ATGGATCCTCCCCTAGTAAACGAGTCTTCCTTCTCGGCCGCCAACCCGTCTGCTTACAGCTTGGCTGAGATTTGGCCGTTCGGCGGAGCATCCGACGGAGTACTGGGACTACGAACCGGTAACTTGGGTCGAAATCTTGGTGGGTTAGCTGAGGGTTCTGGAAATCGTGATGGGTCGGCGGAGGAATCGACAGTGACTGAGCAGAGCGGAGGCGGAGGGAAGAGGAAGAGGGTGAATGTGAGCTCGGAGGATGAGACTTCGAAAATGGTTTCCACTAGTAGTGCTACTAACTTGCATGATTCGAGTGGTAAAAGAATGAAAATGGGGGAATCCAGAGATGAGAATGGTGTTGCGAAAGCTGAAGAAACAAGCTCAGCTAATGGTAACAAACCCGGCGAACCAATCTCTAAAACATTGGAGCCACCTAAAGATTATATTCACGTGAGAGCGAGGAGAGGCCAAGCTACCGATAGCCACAGTCTGGCAGAACGAGCTAGGAGAGAGAAAATAAGTGAGAGAATGAAAATCCTTCAAGACTTGGTTCCGGGATGTAATAAGGTTATTGGAAAGGCACTTGTTCTCGATGAGATTATCAATTACATTCAATCCTTGCAGCGTCAGGTCGAGTTTCTGTCGATGAAGCTTGAAGCAGTTAATTCAAGAATAAATAGGAACCCAGGCATTGAAGGCTATACTACAAAGGATGTTAATGGAACCCAGGCATTTGATGCTGCAGGAATGATATATGGTTCCCAAGCAATACCAAGAGAATATGGTCAAGGTCAAGGCTTACAAACTGAATGGCTGCATATGCAAATTGGCGGTGCTGGTTTTGAAAGAGCAAATTAA 849 46.64 MDPPLVNESSFSAANPSAYSLAEIWPFGGASDGVLGLRTGNLGRNLGGLAEGSGNRDGSAEESTVTEQSGGGGKRKRVNVSSEDETSKMVSTSSATNLHDSSGKRMKMGESRDENGVAKAEETSSANGNKPGEPISKTLEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRINRNPGIEGYTTKDVNGTQAFDAAGMIYGSQAIPREYGQGQGLQTEWLHMQIGGAGFERAN 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9105510 9108131 + Bda012434.2 Bda15g00591 22286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00591 282 SMART finulus 160 210 IPR011598 GO:0046983
Bda15g00591 282 CDD bHLH_AtBPE_like 144 226 - -
Bda15g00591 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 222 IPR036638 GO:0046983
Bda15g00591 282 MobiDBLite consensus disorder prediction 33 142 - -
Bda15g00591 282 Gene3D - 151 227 IPR036638 GO:0046983
Bda15g00591 282 MobiDBLite consensus disorder prediction 84 101 - -
Bda15g00591 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 204 IPR011598 GO:0046983
Bda15g00591 282 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 1 280 - -
Bda15g00591 282 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 280 IPR024097 GO:0006355
Bda15g00591 282 Coils Coil 201 221 - -
Bda15g00591 282 MobiDBLite consensus disorder prediction 103 119 - -
Bda15g00591 282 Pfam Helix-loop-helix DNA-binding domain 158 205 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00566 Bda15g00591 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02276 Bda-Chr1:59116207 Bda15g00591 Bda-Chr15:9105510 8.45E-29 dispersed
Bda07g01581 Bda-Chr7:29316180 Bda15g00591 Bda-Chr15:9105510 1.28E-50 dispersed
Bda11g01242 Bda-Chr11:12947673 Bda15g00591 Bda-Chr15:9105510 5.48E-58 dispersed
Bda13g00303 Bda-Chr13:3849368 Bda15g00591 Bda-Chr15:9105510 2.41E-46 dispersed
Bda15g00591 Bda-Chr15:9105510 Bda08g00061 Bda-Chr8:491731 4.05E-43 dispersed
Bda15g00591 Bda-Chr15:9105510 Bda06g00566 Bda-Chr6:7945300 3.10E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17186 PF00010 HLH 2.30E-08 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00591 - - zju:107418528 379.407