Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00595 | ATGGGAGAGGTGAGAGAAGAAAACCAACGCCTAAAAATGTGCTTAGATCAGATGATGAAAAATTACAGGATGCTACAAATGCAGTTTGATGACATGGTTGGAAAAGATGGAAAGAAAAACAAGATGCCACCGGTAGAAGAAACCGACCTAGTTGCCCTTACGCTCGGAAGATTTCCAAGCGCGGGAAAAACGATCAGTGAAAACATCATGAATTCTCACGAACTGATCAAAGAAAATGATCAACAAATCATGACACAAGAATTAGCTCTAGGGTTAGACTGCAACTTCGATGGCTCTAGATTGAGTGATCGAATAAAGGCTCATTCGCCTAAAGGTCGAACGCCGAGTTCAAAAAGCAACGAAGAGGTCAAAGAAGGAGAAGGGGAAGATCCATGGCCACCCAACAAAGGTTTGAAGACAATGAGAAGTGGAGAAGATGAAGTGATGCAGCAGAATCCACCAAAGAAAGCTAGGGTTTGTGTGAGGGCTCGTTGTGATACGCCAACGATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAGATAGCAAAAGGAAACCCATGCCCAAGAGCTTATTATCGTTGTACTGGAGCTCAATCATGTCCAGTCAGAAAACAGGTGCAAAGATGTGCAGAGGACATGTCGATTTTAATCACTACATACGAAGGAACCCACAACCACCCTCTCTCCGTCTCGGCCACCGCCATGGCATCCACCACTTCTGCAGCGGCGGCAATGCTATTATCCGGCTCATCAACCTCACAATTCAGTCCTAACCCATCAGCAACAACAGCCACCACCACTCAGGCAAATCTCCACGGATTAAACTTCTATCTTTCTGACAATTCAAATTCAAAACAATTTTATTTACCCAATTCTTCCATGTCATCTTCCTCGCCCACACACCCAACAATCACCATAGACCTCACTTCAAATCCGTCTTCTTCTTCTTCGTCTTATGCTTCTTCTTCTTCTTCCCATTTTGGCAGACCTTTTTCTTCATCGTATCCTCCTAGGTATCCTTTCACAAACCTGGATTTCGGTTCTTCTCAGTCCAACCATATGTCTTGGGGCAATGGCCTTCATGGCTATGGAAATCAACTACCTTATAACACAACCCAAATGGGAACTTCTGATATCGGAATTTATATGCAGAAGACAAATAACGTGCCAGTTGTAGCGGCGCCCCCACGACACCCTCTTCCGGACCCAATCGCCGCCGCAACGAAGGCAATTACAGCGGACCCTAGTTTCCAATCTGCTTTAGCGGCGGCATTAACATCATTCATCGGAAATGGTGCTAGCGGCAGTGTCGCCGGTGAAAATTTTCTGGAAAATTTGAAGCGGGTGGAGAAGTTTCCACTGGCGTCGTCTACCCAAAAAGGAAATGGGTGCGGATCGAGCTTCATCAGCACCACGCCGGCGACGAATTCTCAGCATGGGAACTTGACGTTCTTACCTTCAAATTCATCGCCATTTTCGACATCCAAAAGTGCTTCTACATCTCTGGGAGATAACAGAGATCACCAACCTAGTTGA | 1542 | 45.65 | MGEVREENQRLKMCLDQMMKNYRMLQMQFDDMVGKDGKKNKMPPVEETDLVALTLGRFPSAGKTISENIMNSHELIKENDQQIMTQELALGLDCNFDGSRLSDRIKAHSPKGRTPSSKSNEEVKEGEGEDPWPPNKGLKTMRSGEDEVMQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAQSCPVRKQVQRCAEDMSILITTYEGTHNHPLSVSATAMASTTSAAAAMLLSGSSTSQFSPNPSATTATTTQANLHGLNFYLSDNSNSKQFYLPNSSMSSSSPTHPTITIDLTSNPSSSSSSYASSSSSHFGRPFSSSYPPRYPFTNLDFGSSQSNHMSWGNGLHGYGNQLPYNTTQMGTSDIGIYMQKTNNVPVVAAPPRHPLPDPIAAATKAITADPSFQSALAAALTSFIGNGASGSVAGENFLENLKRVEKFPLASSTQKGNGCGSSFISTTPATNSQHGNLTFLPSNSSPFSTSKSASTSLGDNRDHQPS | 513 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9149910 | 9152065 | - | Bda012439.1 | Bda15g00595 | 22290 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00595 | 513 | SMART | WRKY_cls | 170 | 230 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00595 | 513 | Gene3D | WRKY domain | 155 | 231 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00595 | 513 | SUPERFAMILY | WRKY DNA-binding domain | 163 | 230 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00595 | 513 | MobiDBLite | consensus disorder prediction | 103 | 137 | - | - | |
Bda15g00595 | 513 | ProSiteProfiles | WRKY domain profile. | 165 | 231 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00595 | 513 | MobiDBLite | consensus disorder prediction | 103 | 132 | - | - | |
Bda15g00595 | 513 | MobiDBLite | consensus disorder prediction | 292 | 332 | - | - | |
Bda15g00595 | 513 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 1 | 508 | IPR044810 | GO:0003700 | |
Bda15g00595 | 513 | PANTHER | WRKY TRANSCRIPTION FACTOR 61-RELATED | 1 | 508 | - | - | |
Bda15g00595 | 513 | MobiDBLite | consensus disorder prediction | 481 | 513 | - | - | |
Bda15g00595 | 513 | Pfam | WRKY DNA -binding domain | 171 | 229 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda15g00595 | Bda-Chr15:9149910 | Bda15g00959 | Bda-Chr15:17679033 | 3.59E-55 | dispersed | |
Bda14g00841 | Bda-Chr14:6479186 | Bda15g00595 | Bda-Chr15:9149910 | 2.26E-86 | wgd | |
Bda15g00578 | Bda-Chr15:9002564 | Bda15g00595 | Bda-Chr15:9149910 | 0 | wgd | |
Bda15g00595 | Bda-Chr15:9149910 | Bda06g00552 | Bda-Chr6:7798195 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17187 | PF03106 | WRKY | 8.60E-24 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00595 | - | - | tcc:18604620 | 484.952 |