Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00595 ATGGGAGAGGTGAGAGAAGAAAACCAACGCCTAAAAATGTGCTTAGATCAGATGATGAAAAATTACAGGATGCTACAAATGCAGTTTGATGACATGGTTGGAAAAGATGGAAAGAAAAACAAGATGCCACCGGTAGAAGAAACCGACCTAGTTGCCCTTACGCTCGGAAGATTTCCAAGCGCGGGAAAAACGATCAGTGAAAACATCATGAATTCTCACGAACTGATCAAAGAAAATGATCAACAAATCATGACACAAGAATTAGCTCTAGGGTTAGACTGCAACTTCGATGGCTCTAGATTGAGTGATCGAATAAAGGCTCATTCGCCTAAAGGTCGAACGCCGAGTTCAAAAAGCAACGAAGAGGTCAAAGAAGGAGAAGGGGAAGATCCATGGCCACCCAACAAAGGTTTGAAGACAATGAGAAGTGGAGAAGATGAAGTGATGCAGCAGAATCCACCAAAGAAAGCTAGGGTTTGTGTGAGGGCTCGTTGTGATACGCCAACGATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAGATAGCAAAAGGAAACCCATGCCCAAGAGCTTATTATCGTTGTACTGGAGCTCAATCATGTCCAGTCAGAAAACAGGTGCAAAGATGTGCAGAGGACATGTCGATTTTAATCACTACATACGAAGGAACCCACAACCACCCTCTCTCCGTCTCGGCCACCGCCATGGCATCCACCACTTCTGCAGCGGCGGCAATGCTATTATCCGGCTCATCAACCTCACAATTCAGTCCTAACCCATCAGCAACAACAGCCACCACCACTCAGGCAAATCTCCACGGATTAAACTTCTATCTTTCTGACAATTCAAATTCAAAACAATTTTATTTACCCAATTCTTCCATGTCATCTTCCTCGCCCACACACCCAACAATCACCATAGACCTCACTTCAAATCCGTCTTCTTCTTCTTCGTCTTATGCTTCTTCTTCTTCTTCCCATTTTGGCAGACCTTTTTCTTCATCGTATCCTCCTAGGTATCCTTTCACAAACCTGGATTTCGGTTCTTCTCAGTCCAACCATATGTCTTGGGGCAATGGCCTTCATGGCTATGGAAATCAACTACCTTATAACACAACCCAAATGGGAACTTCTGATATCGGAATTTATATGCAGAAGACAAATAACGTGCCAGTTGTAGCGGCGCCCCCACGACACCCTCTTCCGGACCCAATCGCCGCCGCAACGAAGGCAATTACAGCGGACCCTAGTTTCCAATCTGCTTTAGCGGCGGCATTAACATCATTCATCGGAAATGGTGCTAGCGGCAGTGTCGCCGGTGAAAATTTTCTGGAAAATTTGAAGCGGGTGGAGAAGTTTCCACTGGCGTCGTCTACCCAAAAAGGAAATGGGTGCGGATCGAGCTTCATCAGCACCACGCCGGCGACGAATTCTCAGCATGGGAACTTGACGTTCTTACCTTCAAATTCATCGCCATTTTCGACATCCAAAAGTGCTTCTACATCTCTGGGAGATAACAGAGATCACCAACCTAGTTGA 1542 45.65 MGEVREENQRLKMCLDQMMKNYRMLQMQFDDMVGKDGKKNKMPPVEETDLVALTLGRFPSAGKTISENIMNSHELIKENDQQIMTQELALGLDCNFDGSRLSDRIKAHSPKGRTPSSKSNEEVKEGEGEDPWPPNKGLKTMRSGEDEVMQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAQSCPVRKQVQRCAEDMSILITTYEGTHNHPLSVSATAMASTTSAAAAMLLSGSSTSQFSPNPSATTATTTQANLHGLNFYLSDNSNSKQFYLPNSSMSSSSPTHPTITIDLTSNPSSSSSSYASSSSSHFGRPFSSSYPPRYPFTNLDFGSSQSNHMSWGNGLHGYGNQLPYNTTQMGTSDIGIYMQKTNNVPVVAAPPRHPLPDPIAAATKAITADPSFQSALAAALTSFIGNGASGSVAGENFLENLKRVEKFPLASSTQKGNGCGSSFISTTPATNSQHGNLTFLPSNSSPFSTSKSASTSLGDNRDHQPS 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9149910 9152065 - Bda012439.1 Bda15g00595 22290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00595 513 SMART WRKY_cls 170 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda15g00595 513 Gene3D WRKY domain 155 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda15g00595 513 SUPERFAMILY WRKY DNA-binding domain 163 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda15g00595 513 MobiDBLite consensus disorder prediction 103 137 - -
Bda15g00595 513 ProSiteProfiles WRKY domain profile. 165 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda15g00595 513 MobiDBLite consensus disorder prediction 103 132 - -
Bda15g00595 513 MobiDBLite consensus disorder prediction 292 332 - -
Bda15g00595 513 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 508 IPR044810 GO:0003700
Bda15g00595 513 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 1 508 - -
Bda15g00595 513 MobiDBLite consensus disorder prediction 481 513 - -
Bda15g00595 513 Pfam WRKY DNA -binding domain 171 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00595 Bda-Chr15:9149910 Bda15g00959 Bda-Chr15:17679033 3.59E-55 dispersed
Bda14g00841 Bda-Chr14:6479186 Bda15g00595 Bda-Chr15:9149910 2.26E-86 wgd
Bda15g00578 Bda-Chr15:9002564 Bda15g00595 Bda-Chr15:9149910 0 wgd
Bda15g00595 Bda-Chr15:9149910 Bda06g00552 Bda-Chr6:7798195 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17187 PF03106 WRKY 8.60E-24 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00595 - - tcc:18604620 484.952