Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00599 ATGGAAGGAGGAGATGAGCTCCACCACCACCACCGCCATCTCCACCACCACAACCGCCCAACCTTCCCCTTTCAATTACTAGAAAAGAAAGACGACGAAGCTTCCTGCTCCAGCTCCGGATACCCTTCTCTTGCCATTTCCGCAGATCCACCCACCTCTACCTCCCGTTTACAGGCCACCCCCTCCACGTCGGCAGAGCCGTCCAAGAAGCCTCCGCCCAAACGAACATCGACGAAGGACCGCCACACCAAGGTTGACGGCCGTGGCCGCCGCATCAGAATGCCTGCTCTTTGCGCAGCGAGGGTTTTCCAGCTAACCCGCGAGCTGGGTCACAAGTCCGACGGAGAGACCATCGAGTGGCTCCTCCAACAGGCGGAGCCAGCCGTGATCGCCGCTACCGGCACTGGAACAATACCGGCAAACTTCACTTCACTTAATATATCATTAAGAAGCTCCGGCTCAAGCATGTCCGTTCCATCTCAGCTTCGATCAACTTCCTACTATAATCCGAATTTCTCTCTTCAGCAACCGAGAAGAAGTCTTTTTCCGGGAATAGGTTTGTCTCCGGAAAATACATCCACGTTATTGAATTTTCAGTCCAATAGTATGGGTTCTATGCTGCAAGCAAAGCAAGAACTGAGAGATACTTCACTGGAGGTATCTGAAGGGGATGAAGGCATAGGCCGAAAAAGAAGGCCGGAGCAAGATTTGTCGTCTCAACATCAAATGGGAAGCTATTTATTGCAGTCAAGTGCCGGAGCAATTCCGGCTACACATGGGGCTCAAATTCCAGCCAATTTTTGGATGCTTACTAATACAAATAACCAAGTCATGGGTGGCGACCCAATTTGGACATTTCCTTCCGTTAGTAATAGCGCTTTGTATAGGGGGACCATGTCTAGTGGGTTACATTTCATGAATTTTCCGGCCCCGATGACCTTATTGCCCGGTCAACAATTAGGGTCGGTGATCGGGATTGGCAGCGGCGGTAGCAGCGGTGCCAGTGACGGACATTTAAATATGTTGACGGGGCTGAACCCGTATCGATCCATGCAAAATTCGAGTGTGTTGGAATCTCCCGGTAATGGTTCCCACTCACACCATGGTGGCGGTAGCAGCGACAGAGGTGACGATCGACACGACTCAACAACCAACAATTAG 1161 51.42 MEGGDELHHHHRHLHHHNRPTFPFQLLEKKDDEASCSSSGYPSLAISADPPTSTSRLQATPSTSAEPSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSTSYYNPNFSLQQPRRSLFPGIGLSPENTSTLLNFQSNSMGSMLQAKQELRDTSLEVSEGDEGIGRKRRPEQDLSSQHQMGSYLLQSSAGAIPATHGAQIPANFWMLTNTNNQVMGGDPIWTFPSVSNSALYRGTMSSGLHFMNFPAPMTLLPGQQLGSVIGIGSGGSSGASDGHLNMLTGLNPYRSMQNSSVLESPGNGSHSHHGGGSSDRGDDRHDSTTNN 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9200301 9201461 - Bda012443.1 Bda15g00599 22294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00599 386 ProSiteProfiles TCP domain profile. 78 132 IPR017887 -
Bda15g00599 386 MobiDBLite consensus disorder prediction 370 386 - -
Bda15g00599 386 MobiDBLite consensus disorder prediction 215 237 - -
Bda15g00599 386 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 13 384 - -
Bda15g00599 386 MobiDBLite consensus disorder prediction 214 240 - -
Bda15g00599 386 MobiDBLite consensus disorder prediction 72 90 - -
Bda15g00599 386 MobiDBLite consensus disorder prediction 351 386 - -
Bda15g00599 386 MobiDBLite consensus disorder prediction 36 71 - -
Bda15g00599 386 MobiDBLite consensus disorder prediction 31 90 - -
Bda15g00599 386 MobiDBLite consensus disorder prediction 351 369 - -
Bda15g00599 386 Pfam TCP family transcription factor 76 242 IPR017887 -
Bda15g00599 386 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 384 IPR005333 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00846 Bda15g00599 CCT
Bda14g00846 Bda15g00599 ECH
Bda06g00547 Bda15g00599 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00846 Bda-Chr14:6520571 Bda15g00599 Bda-Chr15:9200301 8.18E-103 wgd
Bda15g00574 Bda-Chr15:8942924 Bda15g00599 Bda-Chr15:9200301 0 wgd
Bda15g00599 Bda-Chr15:9200301 Bda06g00547 Bda-Chr6:7746366 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17188 PF03634 TCP 4.70E-40 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00599 - - csv:101221049 501.901