Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00603 | AAGCGAGGGAGGGAGAAGAAGGGTATTAAGAGGAGCAGAGAAGAGAAAAGCAGTAGTTCTAAAATGCTGTCAAGAACTACTATTGCGCAGTATTTTTACATGCCTATAACTCAAGCGGCGAAAGAGCTAAACGTGGGTTTAACTCTTCTGAAGAAAAGATGCAGAGAATTAGGTATCCGCAGATGGCCTCACAGGAAGCTGATGAGTCTCCAAACCCTAATCAAGAACGTTCAGGATTTGAGCAAGGATGATGGGGATGAAACAGAAGCCAAGCTAAGGGATGCAGTAGAATTACTGAAGAGAGAGAGGACGATGATGGAAGAAATGCCGGACCTGCAGCTGGAAGACAACACAAAGAGGCTCAGACAGGCTTGTTTCAAGGCCAACTACAAGAAGAGGAAGTTCATGGGTACAGTGGAATCACAGTCGTCTCCATCAACCGCCAACTTGGATAGCATTGAAGAAGTGGAATTCGAAGAGGATGAAGAAATGAAATCTCTCTTGTCTCAGTGCTCCTTCTCGTCTTCTTCTGGCTTCATCTTTTAG | 546 | 44.87 | KRGREKKGIKRSREEKSSSSKMLSRTTIAQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVQDLSKDDGDETEAKLRDAVELLKRERTMMEEMPDLQLEDNTKRLRQACFKANYKKRKFMGTVESQSSPSTANLDSIEEVEFEEDEEMKSLLSQCSFSSSSGFIF | 181 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9246653 | 9247271 | + | Bda012447.1 | Bda15g00603 | 22298 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00603 | 181 | ProSiteProfiles | RWP-RK domain profile. | 4 | 90 | IPR003035 | - | |
Bda15g00603 | 181 | PANTHER | PROTEIN RKD1-RELATED | 4 | 147 | - | - | |
Bda15g00603 | 181 | PANTHER | PROTEIN RKD4 | 4 | 147 | IPR044607 | GO:0003700 | |
Bda15g00603 | 181 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bda15g00603 | 181 | Pfam | RWP-RK domain | 23 | 70 | IPR003035 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda14g00798 | Bda-Chr14:6156420 | Bda15g00603 | Bda-Chr15:9246653 | 1.82E-09 | dispersed | |
Bda15g00603 | Bda-Chr15:9246653 | Bda11g01641 | Bda-Chr11:50386533 | 1.51E-09 | dispersed | |
Bda15g00603 | Bda-Chr15:9246653 | Bda11g00482 | Bda-Chr11:5105560 | 3.89E-08 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17191 | PF02042 | RWP-RK | 2.50E-21 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00603 | - | - | qlo:115964427 | 218.009 |