Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00603 AAGCGAGGGAGGGAGAAGAAGGGTATTAAGAGGAGCAGAGAAGAGAAAAGCAGTAGTTCTAAAATGCTGTCAAGAACTACTATTGCGCAGTATTTTTACATGCCTATAACTCAAGCGGCGAAAGAGCTAAACGTGGGTTTAACTCTTCTGAAGAAAAGATGCAGAGAATTAGGTATCCGCAGATGGCCTCACAGGAAGCTGATGAGTCTCCAAACCCTAATCAAGAACGTTCAGGATTTGAGCAAGGATGATGGGGATGAAACAGAAGCCAAGCTAAGGGATGCAGTAGAATTACTGAAGAGAGAGAGGACGATGATGGAAGAAATGCCGGACCTGCAGCTGGAAGACAACACAAAGAGGCTCAGACAGGCTTGTTTCAAGGCCAACTACAAGAAGAGGAAGTTCATGGGTACAGTGGAATCACAGTCGTCTCCATCAACCGCCAACTTGGATAGCATTGAAGAAGTGGAATTCGAAGAGGATGAAGAAATGAAATCTCTCTTGTCTCAGTGCTCCTTCTCGTCTTCTTCTGGCTTCATCTTTTAG 546 44.87 KRGREKKGIKRSREEKSSSSKMLSRTTIAQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVQDLSKDDGDETEAKLRDAVELLKRERTMMEEMPDLQLEDNTKRLRQACFKANYKKRKFMGTVESQSSPSTANLDSIEEVEFEEDEEMKSLLSQCSFSSSSGFIF 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9246653 9247271 + Bda012447.1 Bda15g00603 22298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00603 181 ProSiteProfiles RWP-RK domain profile. 4 90 IPR003035 -
Bda15g00603 181 PANTHER PROTEIN RKD1-RELATED 4 147 - -
Bda15g00603 181 PANTHER PROTEIN RKD4 4 147 IPR044607 GO:0003700
Bda15g00603 181 MobiDBLite consensus disorder prediction 1 21 - -
Bda15g00603 181 Pfam RWP-RK domain 23 70 IPR003035 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00798 Bda-Chr14:6156420 Bda15g00603 Bda-Chr15:9246653 1.82E-09 dispersed
Bda15g00603 Bda-Chr15:9246653 Bda11g01641 Bda-Chr11:50386533 1.51E-09 dispersed
Bda15g00603 Bda-Chr15:9246653 Bda11g00482 Bda-Chr11:5105560 3.89E-08 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17191 PF02042 RWP-RK 2.50E-21 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00603 - - qlo:115964427 218.009