Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00608 ATGGCAACAGTCACCGCCCCCGCTCCAGTTTTCCGGCTAACTACTTCGAAAACCAGATTCTTATCCGGCTCTTCCGGTAAACTGAACCGAGAGATTTCTGTTAAATCATCGACTTCTCCGGTTACTTCTTTCAAAGTTGAGGCTAAGAAAGGAGAGTGGCTGCCGGGTCTACCCTCGCCGGCTTACCTCAACGGCAGTCTTCCTGGCGACAACGGGTTTGACCCACTTGGGCTAGCCGAGGATCCAGAAAATCTCCGATGGTACTTCCAAGCTGAGCTAGTCAATGGCCGGTGGGCGATGTTGGGTGTCACCGGAATGCTGCTGCCGGAAGTGTTCACCAAGATCGGAATCCTCAACGTACCCAAATGGTACGACGCCGGAAAATCTGAATACTTCGCATCGTATTCCACTCTTTTCGTGATTGAGTTCATTCTGTTCCACTACGTCGAGATCAGAAGATGGCAAGATATTAAAAACCCAGGATGTGTGAATCAAGATCCAATTTTTAAGCAATACAGCTTACCCCCACATGAACTTGGGTATCCCGGCGGAATTTTTAACCCTCTCAACTTCGCTCCCACCCTCGAAGCCAAAGAGAAGGAGCTCGCAAATGGTAAGTCCAGAATTTTCCATCAAATCTTCTGTCTTCCGTCATCTGAAAAATTTGGAAGGCTGATTTTTATTTGTGCAGGGAGGTTGGCGATGTTGGCGTTTTTGGGGTTTATAATTCAGCACAATGTGACCGGACAAGGGCCGTTCGACAACCTTTTACAGCACCTATCCGACCCATGGCACAACACCATTGTCCAAACACTTGGTCAGTAG 825 48.48 MATVTAPAPVFRLTTSKTRFLSGSSGKLNREISVKSSTSPVTSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYFQAELVNGRWAMLGVTGMLLPEVFTKIGILNVPKWYDAGKSEYFASYSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPHELGYPGGIFNPLNFAPTLEAKEKELANGKSRIFHQIFCLPSSEKFGRLIFICAGRLAMLAFLGFIIQHNVTGQGPFDNLLQHLSDPWHNTIVQTLGQ 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9272694 9273616 - Bda012450.1 Bda15g00608 22303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00608 274 SUPERFAMILY Chlorophyll a-b binding protein 229 272 - -
Bda15g00608 274 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 228 272 - -
Bda15g00608 274 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 207 - -
Bda15g00608 274 SUPERFAMILY Chlorophyll a-b binding protein 50 206 - -
Bda15g00608 274 Pfam Chlorophyll A-B binding protein 60 205 IPR022796 -
Bda15g00608 274 Gene3D Chlorophyll a/b binding protein domain 60 265 - -
Bda15g00608 274 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 207 IPR001344 GO:0009765|GO:0016020
Bda15g00608 274 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 228 272 IPR001344 GO:0009765|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00542 Bda15g00608 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00716 Bda-Chr7:8453364 Bda15g00608 Bda-Chr15:9272694 1.05E-39 dispersed
Bda09g00283 Bda-Chr9:3508116 Bda15g00608 Bda-Chr15:9272694 5.59E-40 dispersed
Bda15g00608 Bda-Chr15:9272694 Bda15g00170 Bda-Chr15:4252509 8.44E-39 dispersed
Bda15g00608 Bda-Chr15:9272694 Bda06g00542 Bda-Chr6:7698513 7.27E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00608 K08910 - ini:109149734 443.736