Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00609 ATGCAAGACCCTGAAACTATGCTAGTGAGCTTCAATCTCACATGGAGTTTCAGCGTCGAGATGGGATACTCTTATTTGATCAGACTCCATTTTTGCGACATTGTGAGCAAGGCTCTGAACAGCCTGTACTTCAACGTGTACATCAATGGAGTAATGGGTGTGTCGAATCTCGATCTCTCGAGTCTCACTGGCTTCCTTTCCTCTGCTTATTACAGAGACCTTGTGGTGAATTCTTCCGCCATTGTTAACAGCACGATCATGGTTCAGGTCGGCCCTTCTAATCTTCAATCCGGGGTCGAAAACGCCATTCTCAACGGCGTGGAGATTATGAAAATAAGCAACGACGCCAGAAGCTTGGATGGTCTGTTCACCGTCGATGAGGTTTTCATTGGGGATCGAGGGAGGAGCTGGATGAAGATCGTCGCCGCCGTCGCGCTCGGAATGGGGGTGACTGCTATGCTGTTTCTTGTCGTAGTTTTTGTTCGACGGAAAAGGAGGCCTCAAGGCCTGGGAAGATTCTTCACTTTCAACACACTACAGAGCGCTACACAGAATTTCGACGAGAAGGCAGTGATCGGCGTCGGTGGGTTTGGAAAAGTGTACATCGGAGAGTTGGAAGACGGAACTAAACTCGCCATCAAAAGAGGAAACGCAAGCTCTGGGCAGGGCATCAACGAGTTCCGAACAGAGATCGACATGCTCTCGAAGCTCCGCCATCGCCATCTCGTATCCCTCATCGGCTTCTGCGACGAAAATTCCGAAATGATTCTCGTCTACGAATACATGGCCAACGGACCTTTACGAGACCATCTCTACGGCTCCAACCTCCCTCCATTGTCGTGGAAAAAGCGACTCGAAATCTGCATTGGAGCTGCCAGAGGTTTACACTATCTCCACACCGGCGCCGCGCAAGGAATCATCCACCGCGATGTCAAGACGACGAACATCCTCCTCGACGAGAATTTCGTCGCCAAAGTTTCCGATTTCGGCCTCTCGAAAGCCGCTCCCTCGCTTGAGCAAACCCACGTCAGCACGGCGGTGAAGGGCAGTTTCGGCTACCTCGATCCCGAATACTTCAGAAGACAACAACTGACTGACAAATCCGACGTTTATTCGTTCGGAGTCGTCCTCTTCGAAGTGTTATGCGCTCGGCTGGTCATAAATCCCGCCCTTCCGAGAGAGCAGGTGAATCTCGCCGAGTGGGCGATGAAATGTCACAGAAAGGGTTCGCTTGAAAAGATAATCGATCCCCATATTGCTTCCTCCATCAGCCATGGCTCCCTCAAAAAATTTATAGAAGCTGCAGAGAAGTGTTTGGCTGAACATGGCGTCGACAGGCCCTCCATGGGAGATGTCTTGTGGAACTTGGAATATGCTTTGCAGCTTCAGGAAGCAATCTCAGAGATTGATCATCCTCCAGAAGAGAACAGTTCTAATCTGGTCGTCCTAAACAAATCAGACGATAATGGTCGTCGAGGAGAACCGAGCGCCGCCGTGAACGATAATTCCGAAGTACTTGTTGGGTCTCCGTTGTTTTCTCAGATCGGAAAGCTTCCAAGGAAGGTGAGATTCCTGATGCGTCGATCCGAACTGGAAAACCGGGGAGTTAATGGGGTTAGAATTTGTGAATGTGATTTTTGTGCAAATCTAGGATTGCTTTTCTTCTTCGAGCCTTGCTTTTTTCTTGGTTTTTATTGA 1698 49.53 MQDPETMLVSFNLTWSFSVEMGYSYLIRLHFCDIVSKALNSLYFNVYINGVMGVSNLDLSSLTGFLSSAYYRDLVVNSSAIVNSTIMVQVGPSNLQSGVENAILNGVEIMKISNDARSLDGLFTVDEVFIGDRGRSWMKIVAAVALGMGVTAMLFLVVVFVRRKRRPQGLGRFFTFNTLQSATQNFDEKAVIGVGGFGKVYIGELEDGTKLAIKRGNASSGQGINEFRTEIDMLSKLRHRHLVSLIGFCDENSEMILVYEYMANGPLRDHLYGSNLPPLSWKKRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVSDFGLSKAAPSLEQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARLVINPALPREQVNLAEWAMKCHRKGSLEKIIDPHIASSISHGSLKKFIEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQEAISEIDHPPEENSSNLVVLNKSDDNGRRGEPSAAVNDNSEVLVGSPLFSQIGKLPRKVRFLMRRSELENRGVNGVRICECDFCANLGLLFFFEPCFFLGFY 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9274797 9276650 - Bda012451.1 Bda15g00609 22304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00609 565 SUPERFAMILY Protein kinase-like (PK-like) 170 457 IPR011009 -
Bda15g00609 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 306 318 IPR008271 GO:0004672|GO:0006468
Bda15g00609 565 MobiDBLite consensus disorder prediction 471 498 - -
Bda15g00609 565 PANTHER OS07G0166700 PROTEIN 169 495 IPR045272 GO:0004714|GO:0006468
Bda15g00609 565 PANTHER OS07G0166700 PROTEIN 1 168 IPR045272 GO:0004714|GO:0006468
Bda15g00609 565 Pfam Protein tyrosine and serine/threonine kinase 190 384 IPR001245 GO:0004672|GO:0006468
Bda15g00609 565 CDD STKc_IRAK 192 457 - -
Bda15g00609 565 ProSiteProfiles Protein kinase domain profile. 186 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00609 565 SMART serkin_6 186 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00609 565 Pfam Malectin-like domain 10 112 IPR024788 -
Bda15g00609 565 Gene3D Phosphorylase Kinase; domain 1 161 261 - -
Bda15g00609 565 Gene3D Transferase(Phosphotransferase) domain 1 262 477 - -
Bda15g00609 565 PANTHER OS03G0759600 PROTEIN 169 495 - -
Bda15g00609 565 PANTHER OS03G0759600 PROTEIN 1 168 - -
Bda15g00609 565 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Bda15g00609 565 Gene3D - 5 115 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00609 Bda-Chr15:9274797 Bda09g01194 Bda-Chr9:42901713 1.10E-176 dispersed
Bda15g00609 Bda-Chr15:9274797 Bda14g00568 Bda-Chr14:4335371 0 transposed
Bda15g00609 Bda-Chr15:9274797 Bda15g01077 Bda-Chr15:20008999 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70106 PF07714 PK_Tyr_Ser-Thr 3.00E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00609 - - cpep:111793369 781.941