Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00631 ATGGAATCTTGGAGATATGTTTCTGGAGAAAATGGATTTCTGTCTGAAGAAATTAACGCTTCTGGCGATCCACTTGCTGGCAGTAAGCACTCTTCGTTCGCCTGGGACTCTCGAAATCCCTGTAATTTCAGCAGCAATCTATTTTCGACTCATCAACAAAATCAGAATCAAGGATTTGGGGGATTGGGTTCCTTAGCAATGGTCGGAAAACAAGCACTCGATAGTTCAATCTTCGATGCTCTGAGCAGCAAGGCTGAAAATGGAAGAATTATGAATCCAGTCATGTCTTCTTCAACTCCATTTCACAGAGATGAGTCGATTTCCAAGCTTTCGGTCTCCGTTGCTGAATCTAACAGTCGAGATTCTTCCCTCATTGATTTAAAACTAGGAAGATTTGCCGACCAGTGGGATGCTCCTTGCAATAAATTTTCAAAGGAGAATCAAATGTTTTCTTTGTCGGAGTCATCTACTCCGTCAAAACGAGTTCGAGCTTCTCCGGTGAACTCTCAGCCAGCCTTTTGCCAAGTTCTTGGGTGTAATAAGGATCTGAGCTCCTCTAAAGACTATCACAAAAGACATAAAGTTTGCGATATTCACTCCAAAACAGCCAGAGTCATTGTCAATGGCATTGAACAAAGGTTTTGTCAGCAGTGTAGCAGGTTGTTTCATTTGCTGGATGCATTTGATGATGGAAAGAGAAGCTGTAGGAAACGGCTGGCCGGCCACAACGAACGCCGGAGAAAACCTCAAGCTGGTATCATTTCTGGAAGGTCGGGGAGGCTGCTTCCGTCGTATAATGTGACATGGAATGTGACCTGTACTTATTCGCAGTTTCTTTCCTCGAAGAACCCGAGCTGCTGCGTTTCGTTTTCATCTTTTTACAACGATACCATCACTCCTTGTCCGTCTTGTGCATGTGGTTGTCAAAACCAAAAAAATTGTGTCACGAACTCGAAGCTTGCACACAAGGCGGGGATAAACACTCCTAAAAAGGATAATACGCCTTTACTACAATGCACACACCACATGTGTCCGATACGTGTTCATTGGCACGTAAAGCTCAACTACAAAGATTATTGGAGGGTGAAAATCGCTATCACGAACTTCAACTATCGATTGAACTACACTCAATGGACACTTGCAGTGCAGCACCCGAATCTCAACAATGTAACCCAAGTATTTAGCTTCGATTACAAGCCACTTGTTCCCTACGAAGCCATTAACGATACTGGCATGTTTTACGGCATGAAATTCTACAATGACTTTTTAATGGAAGCCGGGCCGTCAGGAAATGTGCAGTCCGAGATACTTATGAAGAAGGACGACAAAACATTTACCTTTAAGCAGGGATGGGCATTTCCTCGGAAAATTTACTTCAACGGAGACGAATGTAAGCTGCCTTCGCCCGACGCCTATCCGTTTCTCCCAAACTCAGCTCCGGCAGGATCTATTGCAGTCACAAAAGTGGTGAACTACTTGTTTCTGATGTTGCTCTTCTTATGGTGA 1506 43.89 MESWRYVSGENGFLSEEINASGDPLAGSKHSSFAWDSRNPCNFSSNLFSTHQQNQNQGFGGLGSLAMVGKQALDSSIFDALSSKAENGRIMNPVMSSSTPFHRDESISKLSVSVAESNSRDSSLIDLKLGRFADQWDAPCNKFSKENQMFSLSESSTPSKRVRASPVNSQPAFCQVLGCNKDLSSSKDYHKRHKVCDIHSKTARVIVNGIEQRFCQQCSRLFHLLDAFDDGKRSCRKRLAGHNERRRKPQAGIISGRSGRLLPSYNVTWNVTCTYSQFLSSKNPSCCVSFSSFYNDTITPCPSCACGCQNQKNCVTNSKLAHKAGINTPKKDNTPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRLNYTQWTLAVQHPNLNNVTQVFSFDYKPLVPYEAINDTGMFYGMKFYNDFLMEAGPSGNVQSEILMKKDDKTFTFKQGWAFPRKIYFNGDECKLPSPDAYPFLPNSAPAGSIAVTKVVNYLFLMLLFLW 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9445757 9453096 - Bda012475.2 Bda15g00631 22326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00631 501 PANTHER COBRA-LIKE PROTEIN 267 498 - -
Bda15g00631 501 PANTHER PROTEIN COBRA 267 498 IPR006918 GO:0010215|GO:0031225
Bda15g00631 501 SUPERFAMILY SBT domain 172 253 IPR036893 GO:0003677|GO:0005634
Bda15g00631 501 Gene3D - 165 236 IPR036893 GO:0003677|GO:0005634
Bda15g00631 501 ProSiteProfiles Zinc finger SBP-type profile. 171 249 IPR004333 GO:0003677
Bda15g00631 501 Pfam SBP domain 174 248 IPR004333 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00512 Bda15g00631 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00205 Bda-Chr12:2018623 Bda15g00631 Bda-Chr15:9445757 7.92E-135 dispersed
Bda14g01353 Bda-Chr14:15834627 Bda15g00631 Bda-Chr15:9445757 7.86E-36 dispersed
Bda15g00631 Bda-Chr15:9445757 Bda15g00877 Bda-Chr15:14326156 8.10E-63 dispersed
Bda05g01077 Bda-Chr5:59186670 Bda15g00631 Bda-Chr15:9445757 1.06E-31 transposed
Bda15g00631 Bda-Chr15:9445757 Bda06g00513 Bda-Chr6:7367811 3.56E-108 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17194 PF03110 SBP 6.60E-29 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00631 - - cmo:103494059 437.958