Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00633 ATGGGTTGGGCAATCGCTCTACACGGTGGCGCCGGCGATATTCCACAATCATTGCCACCCGACCGCCGGTTACCGCGCGAGGAAGCCCTTCGCCACTGTCTTCAGATTGGAGTCGAAGCTCTCGAAGCCCAAAAGTCTCCGTTGGATGTCGTTGAACTCGTGGTTAGGGAGCTGGAAAATAACCCGCATTATAATGCCGGTAGAGGTTCTGTTCTGAACAACGATGGTGCAGTGGAAATGGAAGCTAGTATCATGGATGGTATGACAAAGAGATGTGGAGCTGTTTCTGGACTGACCACGGTTGTTAATCCTGTGTCTCTGGCAAGGCTGGTCATGGAGAAGACTCCTCATATTTATCTTGGATTTGATGGAGCTGAGGCTTTTGCTCGACAACAAGGGGTTGAGACTGTAGACCCTAGTTACTTTATCACTCCACAGAATATTGAACGGCTACAGCAGGCAAAAGAGGCCAACAGAGTGCAGATAGATTACACACAACCAACTTCTCGAGATCTTAAAATTGAAGCACAAGCTGCCTCAGGCGATAGTCAAATTGGGACGGTCGGGTGTGTGGCTGTCGATAGTCGAGGGAATTTGGCGGCAGCAACTTCTACGGGTGGATTAGTGAACAAAATGGTTGGTAGAATTGGAGACACACCCATTATAGGAGCCGGGACGTATGCTAACAATCTTTGTGCAGTGTCTGCTACGGGCATAGGCGAAGCTATTATCCGAGGTACGGTTGCAAGAGATGTCGCGGCTCTAATGGAGTTCAAGTCTCTGTCTCTCAAGGAAGCAGCTGCTTATGTTGTGGAGCAGAGTGTTCCGAAAGGCAGTGTCGGTTTAATTGCTGTATCTGCTACCGGTGAAGTCGCCATGCCTTTTAACACAACTGGTATGTTCAGAGCTTGTGCCACTGAAGATGGATTTTCAGAAATTGCCATCTGGCCTTCTCCTTAG 960 49.06 MGWAIALHGGAGDIPQSLPPDRRLPREEALRHCLQIGVEALEAQKSPLDVVELVVRELENNPHYNAGRGSVLNNDGAVEMEASIMDGMTKRCGAVSGLTTVVNPVSLARLVMEKTPHIYLGFDGAEAFARQQGVETVDPSYFITPQNIERLQQAKEANRVQIDYTQPTSRDLKIEAQAASGDSQIGTVGCVAVDSRGNLAAATSTGGLVNKMVGRIGDTPIIGAGTYANNLCAVSATGIGEAIIRGTVARDVAALMEFKSLSLKEAAAYVVEQSVPKGSVGLIAVSATGEVAMPFNTTGMFRACATEDGFSEIAIWPSP 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9467042 9468787 - Bda012477.1 Bda15g00633 22328

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00633 319 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 316 - -
Bda15g00633 319 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 316 IPR029055 -
Bda15g00633 319 Gene3D (Glycosyl)asparaginase 187 318 - -
Bda15g00633 319 CDD Asparaginase_2 4 309 - -
Bda15g00633 319 Pfam Asparaginase 3 316 IPR000246 GO:0016787
Bda15g00633 319 PANTHER L-ASPARAGINASE 1 316 IPR000246 GO:0016787
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00633 K13051 ASRGL1, iaaA; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] - qsu:112028955 528.094
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00198 Bda-Chr3:1585007 Bda15g00633 Bda-Chr15:9467042 4.04E-131 dispersed
Bda13g01060 Bda-Chr13:12375294 Bda15g00633 Bda-Chr15:9467042 4.77E-69 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g428 . . . Bda15g00633 Bpe12g00515 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma08g00251 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012222 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda15g00633 Bda_Chr15 FPKM 0.0 0.53597 0.761929 0.504795 0.216046 0.26935 0.306804 0.0 0.0