Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00643 ATGCTGTCGTCTAACTTCTTTCCGTTGCTTCTTCTTCTTCTTCTTCTCCATGGTTTTGAAACTCAGTCTCCTAATGGCTACGTTGAAGCTCGAAGCTCTATTGCAAACATATCAGATGATGGTCTCTCTTTGCTGGATTTCAAGTCCATGATTGATGATCCTTTTGGAGTTCTCCGTTCCTGGAACGATTCTCTCCATTTTTGCAGATGGGAAGGAGTCACTTGCGGCCGTCGGCATCGACGAGTCACCATTTTGGACCTCAGCCATAGAAGCTTGGACGGTTCTTTGTCTCCATCATTGGGTAACCTCACTTTTCTTAGATATATATATTTGCAGAACAACACATTCAACAGGAGAATCCCGGAAGAGATAGGTCGTCTATCCAGATTGGAGGATTTGTTTCTGCATAACAACTCATTGAACGGAGAGATCCCTAGAAATCTCTCTCGTTGCTCCAAGCTCTTAATTCTGAACCTTGGTTTCAACAATCTTGTAGGAAACATTCCGATTGAGATATTCTCCATTTCAGGCCTTCAACGTTTTGGATTCCACGGCAACAACATTTCAGGAGAGATCCCGTCTGCTATAGGAAATCTTACTTCATTAGAAGCCTTGTCGGTTGCAGGCAATCTTTTAGGTGGAGGCATACCTTCTTCGATCGGCCTTCTCAGAAACTTGAAGTTCTTATCATTAGGCGGAAATCGACTTTCAGGCGTCTTTCCTTCATCTATGTACAATCTTTCATTGATCGAAACTTTTGCCGTCCAAAGTAATCAACTTCATGGAAGCCTACTGCCTGACATAGGCCACTCTTTCCCTGAGCTTAGATACTTCCAAATCGGCTTCAATAACTTTACAGGCCATGTTCCTCCCTCCTTTTCCAATGCTTCAAACATTGAGTATTTTGAATTAACTGAGAACAACTTCTTTGGAAAAGTCAGTGTTGATTTTGGTGGAGCCAAAAACTTATCGGCACTGCTTTTAGACAGTAATCATCTCGGAAGTGGTGATCCTGACGAACTGAATTTTCTAAGCTCATTGGGGAATTGCAGCAAGCAATCTCAACTGAATTTGTTTGACAACTCATTTAGAGGAAATCTGCCTGGTTCGTTGGCCAACCTTTCCTCTCATCTCCGAATATTTGCGGTCGGACAAAATCAATTGTTTGGTGAAATACCATCAGGAATTGGCAATCTTGTGGCCTTAAATTTTTTACAACTGCAATTCAATTATCTTACAGGAGAATTGCCCTCTGAAATTGGCAGGCTTCTAAACTTGAGATATTTCAGTGCAGCTTCAAATGGTCTTTCAGGACAACTTCCTTCTGCCATTGGAAACTTAACAAAATTGATCGTACTTGATCTACAGATTAATAATTTTCATGGAGGCATTCCACATAGCATTGAAAATTGCCAGGAGCTATCCTTCTTGTCACTTGGCGAGAATAATCTTAGTGGCAGCTTTCCTGAACAAGTTTTTGACTTTCCAAACTTAGGACGGCTGCTGGATTTATCTAGCAACAGGTTTAGTGGAGAATTGCCTGCTAAAATAAGTAGTCTAAAAAGTTTGACTGCATTACTTTTATTTGGCAATCAACTTTCTGGAAATATTCCGAGTGAGCTTGGCGATTGCGTAAGTTTGGAATATCTCGCCATGCAGGAAAATTACTTCCATGGATCTATTCCTCCAACCTTTAGTTCGTTGAGAGGCCTTCGAGTACTTGATCTTTCTAACAACAATTTGTCTGGTCAAGTTCCAGATTTTTTGTCAACTTTTTCTCTCACTTATTTGAACTTATCTTTCAATAATTTTGAGGGCGAGGTTCCAACTAATGGAGTTTTTTTAAATGCATCTTTGTTCTCATTGCTCGGGAATGAGAGACTCTGCGGTGGAATCACCGCTCTGCACTTGCCCAATTGTACTCATGAAGCAAGTAAGAAGCCAAAATTGACCAAGCTTCTGAAAATTATTCTATCTCTATGCATTTGTCTCTTCGGGTTGGCTGCAATATCATTCTTCCTACTCTGTTTGGTTCCTAAGAAAAAGAGAAAGAAAGCAGAAGCATCAAAATTTGAAGATCCATTGTTCCTAGAGGTCTCATACAGTGACCTCCTTAAAGCAACAGATAACTTCTCTTCGAATAATTTGATTGGGAACGGATACTTCAGCTCAGTATATAAGGGTTACCTCGAAAAGATAGAAGAAATAGTCGCCATTAAAGTACTTAATCTGGAACGCCATGGAGCAATGAAAAGTTTTGCATCAGAATGCGAAGCGCTGAGAAATATTCGTCATAGAAATCTATTGAAAACAATAACTTCATGCTCCTCCGTTGATTTCCGTGGAAATGATTTCAAAGCTCTTGTTTATGAATTCATGGCTAATGGAAGTCTAGATTCATGGCTGCATGTCAGCAGTAGTCTAGATCGAGAGGGAGGAGATCTGAAATTTCTTCAACGTGTAAATATTGCAATCGATGTGGCTACAGGACTCGATTATCTTCACAATCATTGTCATATCCCAATCGTTCATTGCGATTTGAAGCCGAGCAACATTCTTCTAGACGAAGACATGACTGCCCATATTGGAGATTTTGGGCTAACAAAACTTCTTCCAGAACTAACAAACTTTACTGAAAATAGCTCGATCGGAATACGAGGAACCATTGGTTACACTGCTCCAGAATATGGTCAGGGAAGTGAGGTTTCTGCTCAGGGTGACATCTATAGCTACGGGATTCTACTGTTAGAAATGATAACAAGAAAAAGACCAACCGATGAGATGTTCATTGAAGGACTAAACCTCCATTCTTATGCTGGGAGGGCACTATCTAGCCAAGTACTTGACATTGTTGATCCATGTCTCTTATCTAGCAAAGAATCAGAGAAGACTAAAACGATAAACTCCTTGGTTTCTATGGTAAAGCTCGGAGTGGCATGTTCGGTGAATTCTCCACGAGAACGGATTGACACCAAAAGCATTTGTCATGAGCTGCGAATAATAAGAAATTTCTTGCGTGAGCAGAACAATACTTAA 3036 40.45 MLSSNFFPLLLLLLLLHGFETQSPNGYVEARSSIANISDDGLSLLDFKSMIDDPFGVLRSWNDSLHFCRWEGVTCGRRHRRVTILDLSHRSLDGSLSPSLGNLTFLRYIYLQNNTFNRRIPEEIGRLSRLEDLFLHNNSLNGEIPRNLSRCSKLLILNLGFNNLVGNIPIEIFSISGLQRFGFHGNNISGEIPSAIGNLTSLEALSVAGNLLGGGIPSSIGLLRNLKFLSLGGNRLSGVFPSSMYNLSLIETFAVQSNQLHGSLLPDIGHSFPELRYFQIGFNNFTGHVPPSFSNASNIEYFELTENNFFGKVSVDFGGAKNLSALLLDSNHLGSGDPDELNFLSSLGNCSKQSQLNLFDNSFRGNLPGSLANLSSHLRIFAVGQNQLFGEIPSGIGNLVALNFLQLQFNYLTGELPSEIGRLLNLRYFSAASNGLSGQLPSAIGNLTKLIVLDLQINNFHGGIPHSIENCQELSFLSLGENNLSGSFPEQVFDFPNLGRLLDLSSNRFSGELPAKISSLKSLTALLLFGNQLSGNIPSELGDCVSLEYLAMQENYFHGSIPPTFSSLRGLRVLDLSNNNLSGQVPDFLSTFSLTYLNLSFNNFEGEVPTNGVFLNASLFSLLGNERLCGGITALHLPNCTHEASKKPKLTKLLKIILSLCICLFGLAAISFFLLCLVPKKKRKKAEASKFEDPLFLEVSYSDLLKATDNFSSNNLIGNGYFSSVYKGYLEKIEEIVAIKVLNLERHGAMKSFASECEALRNIRHRNLLKTITSCSSVDFRGNDFKALVYEFMANGSLDSWLHVSSSLDREGGDLKFLQRVNIAIDVATGLDYLHNHCHIPIVHCDLKPSNILLDEDMTAHIGDFGLTKLLPELTNFTENSSIGIRGTIGYTAPEYGQGSEVSAQGDIYSYGILLLEMITRKRPTDEMFIEGLNLHSYAGRALSSQVLDIVDPCLLSSKESEKTKTINSLVSMVKLGVACSVNSPRERIDTKSICHELRIIRNFLREQNNT 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9641376 9644492 + Bda012491.2 Bda15g00643 22338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00643 1011 ProSiteProfiles Protein kinase domain profile. 711 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00643 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Bda15g00643 1011 Gene3D Ribonuclease Inhibitor 345 643 IPR032675 -
Bda15g00643 1011 SMART serkin_6 711 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00643 1011 Pfam Leucine rich repeat 546 604 IPR001611 GO:0005515
Bda15g00643 1011 Gene3D Ribonuclease Inhibitor 186 252 IPR032675 -
Bda15g00643 1011 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Bda15g00643 1011 SUPERFAMILY L domain-like 38 333 - -
Bda15g00643 1011 Pfam Protein kinase domain 713 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00643 1011 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 23 1005 - -
Bda15g00643 1011 Gene3D Phosphorylase Kinase; domain 1 676 792 - -
Bda15g00643 1011 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 23 1005 - -
Bda15g00643 1011 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Bda15g00643 1011 Gene3D Ribonuclease Inhibitor 36 185 IPR032675 -
Bda15g00643 1011 Gene3D Transferase(Phosphotransferase) domain 1 793 1010 - -
Bda15g00643 1011 Gene3D Ribonuclease Inhibitor 256 344 IPR032675 -
Bda15g00643 1011 SUPERFAMILY L domain-like 376 630 - -
Bda15g00643 1011 SUPERFAMILY Protein kinase-like (PK-like) 692 999 IPR011009 -
Bda15g00643 1011 SMART LRR_typ_2 127 151 IPR003591 -
Bda15g00643 1011 SMART LRR_typ_2 399 423 IPR003591 -
Bda15g00643 1011 SMART LRR_typ_2 520 544 IPR003591 -
Bda15g00643 1011 SMART LRR_typ_2 223 246 IPR003591 -
Bda15g00643 1011 SMART LRR_typ_2 103 126 IPR003591 -
Bda15g00643 1011 SMART LRR_typ_2 568 592 IPR003591 -
Bda15g00643 1011 SMART LRR_typ_2 447 471 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00229 Bda-Chr7:2730530 Bda15g00643 Bda-Chr15:9641376 0 dispersed
Bda09g00302 Bda-Chr9:3786046 Bda15g00643 Bda-Chr15:9641376 0 dispersed
Bda10g00685 Bda-Chr10:41091940 Bda15g00643 Bda-Chr15:9641376 0 dispersed
Bda14g00169 Bda-Chr14:1167626 Bda15g00643 Bda-Chr15:9641376 0 dispersed
Bda15g00643 Bda-Chr15:9641376 Bda15g00646 Bda-Chr15:9908482 0 dispersed
Bda15g00643 Bda-Chr15:9641376 Bda15g00644 Bda-Chr15:9798340 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70108 PF00069 Pkinase 1.40E-41 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00643 - - pop:7470963 1023.08