Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00644 ATGCTGTCGTCTAACTTCTTCCCGTTGCTTCTTCTTCTTCTTCTTCTCCATGGTTTTGAAACTCAGTCTCCTAATGGTTATGTTGCAGCTCGAACCTCTGTTCCAAACACATCAGATGATGGTCTCTCTTTGCTGGATTTTAAGTCCATGATTGAAGATTCTTTTGGAGTTCTCCGTTCCTGGAACAATTCTCTGCATTTTTGCAGATGGGAAGGAGTCACCTGCGGCCGTCGACATCGACGAGTCACCGTTTTGGACCTCAGCCATAAAAGCTTGGTCGGTTCTTTGTCTCCATCGTTGGGTAACCTCACTTTTCTTAAATATATATATTTGGAGAACAACGCATTCAACGGGAGAATACCGGAGGAGATAGGTCGTCTATCCAGATTGGAGATTTTATTTTTGCATAACAACTCATTGAACGGAGAGATCCCTAGAAATCTCTCTCGCTGCTCCAACCTCTTACTTCTCCACCTTGGTAATAACAATCTCGTAGGAAGCTTTCCAATTGAGATATTTTGCATTTCCGTCCTTCAACTTCTTGCATTCCACCAAAACAACATTTCAGGAGAGATCCCGTCTGCTATAGGAAATCTTACTTCATTAGAAGCCTTGTCGGTTTCAGGTAATCTTTTAGGTGGAGGCATACCTTCCTCGATCGGCCTTCTCAAAAACTTGAAGACCTTAGCATTAGGCGGAAATAGACTTTCAGGCATCTTACCTTCATCTATGTACAATCTTTCATTGATCGAAGTTTTCTCCGTCGAAAGTAATCAACTTCATGGAAGCCTACAGCCTGACATGGCCCACTCTTTCCCAGAGCTTAGATACTTCCAAATCGGCATCAATAACTTTACAGGCCATGTTCCTCCCTCCTTTTCCAATGCTTCAAACATTGAGTATTTTGAATTAGTTGAGAATAACTTCTTTGGAAAAGTCAGTGTTGATTTTGGTGGAGCCAAAAACTTATCAGCATTGATTTTAGAAAGTAATCATCTCGGAAGTGGTGATCCCGACGAACTGAATTTTCTAAGCTCATTGGCGAATTGCAGCAAGCTATCTCGACTGACTTTGTCTGACAACTCATTTAGAGGAATTCTGCCTGGTTCGTTGGCCAATCTTTCCTCTCATCTCCGACTATTTGAGGTCGGACAAAATCAATTGTTTGGTGAAATACCATCAGGAATTGGCAATCTTGTGGCCTTAAATATTTTAGGACTGCAATTCAATTATCTTACAGGAGACTCCTCTGAAATTTGCAGGCTTCTAAACTTGAGATATTTCACTGCAGCTTCAAATGGTCTTTCAGGAGAACTTCCTTCTGCCATTGGAAACTTAACAAAATTGATCGCACTCGATCTACAGATTAATAATTTTCATGGAGGCATTCCACAGAGCATTAAAAATTGCCAGGAGCTGTCCTTCTTATCACTTCGCAAGAATAATCTTAGTGGCAGCTTTCCTGAACAAGTTTTTGACTTTCCAAACTTAGGACAGAGGCTGGATTTATCTAGCAACAGGTTTAGTGGAGAATTGCCTGCTAAAATCAGTAGTCTAAAAACATTGACTTCATTACATTTATCTGATAATCAACTTTCTGGAAATATTCGGAGTGAACTTGGCGATTGCGTAAGTTTGGAATATCTCGCCATGCAGGGGAATTACTTCAATGGATCTATTCCTCCAACCTTTAGTTTGTTGAGAGGCCTTCGACAACTTGATCTTTCTAACAACAATTTGTCTGGTCAAGTTCCTGATTTTCTGTCAACTTTTTCGCTCACCTATTTGAACTTATCTTTCAATAATTTTGAGGGGGAGGTTCCAACTAATGGAGTTTTTTCAAATGCATCTTTGTTCTCATTGCTAGGGAATGAGAGACTCTGCGGTGGAATCACCGCTCTGCGCCTGGCCAATTGTACTCATGAAGCAAGTAAGAAGCCAAAATTGACCAAGCTTCTGAAAATTGTTCTATCTCTATGCATTTGTCTCTTCGGGTTGGCTGGAATATCATTCTTCTTACTCTGTTTGGTTCCTAAGAAAAAGAGAAAGAAAGCAGAAGCATCAAAATTGGAAGACCCATTATTCCTAGAGGTCTCATACAGTGACCTCATTAAAGCAACAGATAACTTCTCTTCGAATAATTTGATTGGGAACGGATACTTCAGCTCTGTATATAAGGGTTACCTCAAAAAGATAGGAGAAACAGTCGCCATTAAAGTACTTAATCTTGAACGCCATGGAGCAATGAAAAGTTTTGCATCAGAATGCGAAGCGCTGAGAAATATTCGTCATAGAAATCTATTGAAAACAATAACTTCATGCTCCTCCGTTGATTTCCATGGAAATGATTTCAAAGCTCTTGTTTATGAATTCATGGCTAATGGAAGTCTAGATTCATGGCTGCATGTCAGCAGCAGTAGTCCAGGTCGAGAGGGAGCAGATCTGAAATTTCTTCAACGTGTAAATATTGCAATCGATGTGGCCACAGGACTGGATTATCTTCACAATCATTGTCACGTCCCAATCGTTCATTGCGATTTGAAGCCGAGCAACATTCTTCTAGACGAAGACATGACTGCCCGTATTGGAGATTTTGGGCTAACAAAACTTCTTCCAGAACTAACAAATTTTACTGAAAATATCTCGATTGGAATACGAGGAACCATTGGTTACGCTGCTCCAGGTATGACTAACAACCAATGTATAATTTATTTAACATGTTTTATTACCAATATGTTAACTAATAGAAATTTTATGAATATAGAATATGGTCAGGGAAGTGAAGTTTCTGCTCAGGGTGACATCTATAGCTACGGAATTCTACTGTTAGAGATGATAACAGGAAAAAGACCAACTGATGAGATGTTCATCGAAGGACTAAACCTCCATTCTTATGCTGGGAGGGCACTATCTAGCCAAGTACTTGACATTGTTGATCCATGCCTCTTGCCTAACAAAGAATCAGAGAAGACTAAAACGATAAACTCTTTGGTTTCTATAGTAAAGCTCGGAGTGGCGTGTTCAGTGAAATCTCCACGAGAACGCATTGACACCAAAAGCATTTGTCATGAGCTGCGAATAGTAAGAAATTCTTTGCTTGGGCCGAACAATACTTGA 3117 40.07 MLSSNFFPLLLLLLLLHGFETQSPNGYVAARTSVPNTSDDGLSLLDFKSMIEDSFGVLRSWNNSLHFCRWEGVTCGRRHRRVTVLDLSHKSLVGSLSPSLGNLTFLKYIYLENNAFNGRIPEEIGRLSRLEILFLHNNSLNGEIPRNLSRCSNLLLLHLGNNNLVGSFPIEIFCISVLQLLAFHQNNISGEIPSAIGNLTSLEALSVSGNLLGGGIPSSIGLLKNLKTLALGGNRLSGILPSSMYNLSLIEVFSVESNQLHGSLQPDMAHSFPELRYFQIGINNFTGHVPPSFSNASNIEYFELVENNFFGKVSVDFGGAKNLSALILESNHLGSGDPDELNFLSSLANCSKLSRLTLSDNSFRGILPGSLANLSSHLRLFEVGQNQLFGEIPSGIGNLVALNILGLQFNYLTGDSSEICRLLNLRYFTAASNGLSGELPSAIGNLTKLIALDLQINNFHGGIPQSIKNCQELSFLSLRKNNLSGSFPEQVFDFPNLGQRLDLSSNRFSGELPAKISSLKTLTSLHLSDNQLSGNIRSELGDCVSLEYLAMQGNYFNGSIPPTFSLLRGLRQLDLSNNNLSGQVPDFLSTFSLTYLNLSFNNFEGEVPTNGVFSNASLFSLLGNERLCGGITALRLANCTHEASKKPKLTKLLKIVLSLCICLFGLAGISFFLLCLVPKKKRKKAEASKLEDPLFLEVSYSDLIKATDNFSSNNLIGNGYFSSVYKGYLKKIGETVAIKVLNLERHGAMKSFASECEALRNIRHRNLLKTITSCSSVDFHGNDFKALVYEFMANGSLDSWLHVSSSSPGREGADLKFLQRVNIAIDVATGLDYLHNHCHVPIVHCDLKPSNILLDEDMTARIGDFGLTKLLPELTNFTENISIGIRGTIGYAAPGMTNNQCIIYLTCFITNMLTNRNFMNIEYGQGSEVSAQGDIYSYGILLLEMITGKRPTDEMFIEGLNLHSYAGRALSSQVLDIVDPCLLPNKESEKTKTINSLVSIVKLGVACSVKSPRERIDTKSICHELRIVRNSLLGPNNT 1038
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9798340 9801456 + Bda012492.5 Bda15g00644 22339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00644 1038 Gene3D Ribonuclease Inhibitor 268 344 IPR032675 -
Bda15g00644 1038 Gene3D Ribonuclease Inhibitor 157 267 IPR032675 -
Bda15g00644 1038 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 15 1033 - -
Bda15g00644 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Bda15g00644 1038 ProSiteProfiles Protein kinase domain profile. 710 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00644 1038 SMART serkin_6 710 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00644 1038 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Bda15g00644 1038 Pfam Protein kinase domain 712 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00644 1038 Gene3D Ribonuclease Inhibitor 345 641 IPR032675 -
Bda15g00644 1038 SMART LRR_typ_2 350 373 IPR003591 -
Bda15g00644 1038 SMART LRR_typ_2 127 151 IPR003591 -
Bda15g00644 1038 SMART LRR_typ_2 223 246 IPR003591 -
Bda15g00644 1038 SMART LRR_typ_2 399 422 IPR003591 -
Bda15g00644 1038 SMART LRR_typ_2 519 543 IPR003591 -
Bda15g00644 1038 SMART LRR_typ_2 567 591 IPR003591 -
Bda15g00644 1038 SUPERFAMILY L domain-like 38 333 - -
Bda15g00644 1038 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 15 1033 - -
Bda15g00644 1038 SUPERFAMILY L domain-like 376 629 - -
Bda15g00644 1038 Gene3D Transferase(Phosphotransferase) domain 1 792 1033 - -
Bda15g00644 1038 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Bda15g00644 1038 Gene3D Ribonuclease Inhibitor 42 153 IPR032675 -
Bda15g00644 1038 SUPERFAMILY Protein kinase-like (PK-like) 692 1025 IPR011009 -
Bda15g00644 1038 Gene3D Phosphorylase Kinase; domain 1 691 791 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00659 Bda-Chr9:9986324 Bda15g00644 Bda-Chr15:9798340 9.13E-19 dispersed
Bda15g00644 Bda-Chr15:9798340 Bda15g00646 Bda-Chr15:9908482 0 proximal
Bda15g00643 Bda-Chr15:9641376 Bda15g00644 Bda-Chr15:9798340 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70109 PF00069 Pkinase 4.80E-37 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00644 - - pop:7470963 974.926